RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 DCAF4L1Q3SXM0 396 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 AGO2Q9UKV8 859 aaKnown RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 NFU1Q9UMS0 254 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 ESRRBO95718 433 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 ALX1Q15699 326 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 ABHD10Q9NUJ1 306 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 ZBTB12Q9Y330 459 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 JCADQ9P266 1359 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 NBPF26B4DH59 902 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 PHEXP78562 749 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 NBPF10Q6P3W6 841 aaKnown RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 NBPF15Q8N660 670 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 PIN4Q9Y237 131 aaKnown RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 PCDHA10Q9Y5I2 948 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 RNF149Q8NC42 400 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 ZNF564Q8TBZ8 553 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 EDEM3Q9BZQ6 932 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 NPHP3-ACAD11A0A0J9YXS1 232 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 PVALEFA0A1B0GWK0 134 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 TAF1CQ15572 869 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 SRRM1Q8IYB3 904 aaKnown RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 WHAMMQ8TF30 809 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 STAP1Q9ULZ2 295 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 DIS3Q9Y2L1 958 aaKnown RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 HSPA4LO95757 839 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 FDX1P10109 184 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 CA4P22748 312 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 DRAP1Q14919 205 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 FBXL13Q8NEE6 735 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 N4BP2L2Q92802 583 aaPredicted RBP18.44■□□□□ 0.54
SHANK1-201ENST00000293441 SIK2Q9H0K1 926 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 SEL1LQ9UBV2 794 aa18.44■□□□□ 0.54
SHANK1-201ENST00000293441 SYNGAP1Q96PV0 1343 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 ARL4CP56559 192 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 TFDP2Q14188 446 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 SNX19Q92543 992 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 TTC7AQ9ULT0 858 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-201ENST00000293441 SUGT1Q9Y2Z0 365 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 USP11P51784 963 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 MXD4Q14582 209 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-201ENST00000293441 ATG16L1Q676U5 607 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 NEDD1Q8NHV4 660 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 PARD6BQ9BYG5 372 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 TRPM1Q7Z4N2 1603 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 PDCD7Q8N8D1 485 aaKnown RBP18.43■□□□□ 0.54
SHANK1-201ENST00000293441 NSUN4Q96CB9 384 aaKnown RBP18.43■□□□□ 0.54
SHANK1-201ENST00000293441 ACAP3Q96P50 834 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 ERCC6L2Q5T890 1561 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 ORC4O43929 436 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 C12orf60Q5U649 245 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 STRIP1Q5VSL9 837 aa18.43■□□□□ 0.54
SHANK1-201ENST00000293441 OSBPL5Q9H0X9 879 aaPredicted RBP18.43■□□□□ 0.54
SHANK1-201ENST00000293441 PIK3R2O00459 728 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 SRGAP2O75044 1071 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 STAT5BP51692 787 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 COG2Q14746 738 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 TTC17Q96AE7 1141 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 SPON2Q9BUD6 331 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 MAP3K20Q9NYL2 800 aaKnown RBP18.42■□□□□ 0.54
SHANK1-201ENST00000293441 HACL1Q9UJ83 578 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 CEP152O94986 1710 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 ORC2Q13416 577 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-201ENST00000293441 SNCBQ16143 134 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 TTC13Q8NBP0 860 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 TMEM106CQ9BVX2 250 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 SCAF8Q9UPN6 1271 aaKnown RBP18.42■□□□□ 0.54
SHANK1-201ENST00000293441 SNX24Q9Y343 169 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 PODXLO00592 558 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 RCAN1P53805 252 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 FAM102AQ5T9C2 384 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-201ENST00000293441 PRAMEF18Q5VWM3 479 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 LINC00116Q8NCU8 138 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 FARP1Q9Y4F1 1045 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-201ENST00000293441 HSPA8P11142 646 aaKnown RBP18.42■□□□□ 0.54
SHANK1-201ENST00000293441 GRIK1P39086 918 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 LMBRD2Q68DH5 695 aaPredicted RBP18.42■□□□□ 0.54
SHANK1-201ENST00000293441 KRT39Q6A163 491 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 CRAMP1Q96RY5 1269 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 CNOT10Q9H9A5 744 aaKnown RBP18.42■□□□□ 0.54
SHANK1-201ENST00000293441 DAGLAQ9Y4D2 1042 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 VEPH1Q14D04 833 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 ZBTB41Q5SVQ8 909 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 C6orf118Q5T5N4 469 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 KCNV1Q6PIU1 500 aa18.42■□□□□ 0.54
SHANK1-201ENST00000293441 SMAD1Q15797 465 aaKnown RBP18.41■□□□□ 0.54
SHANK1-201ENST00000293441 SRBD1Q8N5C6 995 aaKnown RBP18.41■□□□□ 0.54
SHANK1-201ENST00000293441 KRT82Q9NSB4 513 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 IP6K2Q9UHH9 426 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 EMSYQ7Z589 1322 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 CTSHP09668 335 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 CUL1Q13616 776 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 EFHC2Q5JST6 749 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 ANGEL2Q5VTE6 544 aaKnown RBP18.41■□□□□ 0.54
SHANK1-201ENST00000293441 BTBD8Q5XKL5 378 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 PRR5LQ6MZQ0 368 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 CYP26B1Q9NR63 512 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 FLT1P17948 1338 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 E5RI56 91 aa18.41■□□□□ 0.54
SHANK1-201ENST00000293441 FTLP02792 175 aaPredicted RBP18.41■□□□□ 0.54
SHANK1-201ENST00000293441 TRIM49P0CI25 452 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms