RNA–Protein interactions for RNA: ENSMUST00000093196.10

Hmgb1-202, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 1,092 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-202ENSMUST00000093196 Col7a1Q63870 2944 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Gm4302E9PX25 294 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Entpd2O55026 495 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Ceacam1P31809 521 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Foxk1P42128 719 aaKnown RBP13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Sept1P42209 366 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Gjb6P70689 261 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Lmntd2Q0VET5 664 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Tmc5Q32NZ6 967 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Nlrp9bQ66X22 1003 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Dennd5aQ6PAL8 1287 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Bbs9Q811G0 885 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Myl6bQ8CI43 207 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Q8K2W9 541 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Ceacam2Q925P2 520 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Akirin1Q99LF1 191 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Clcn2Q9R0A1 908 aa13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Mad1l1Q9WTX8 717 aaKnown RBP13.03□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Sptan1P16546 2472 aaKnown RBP13.02□□□□□ -0.32
Hmgb1-202ENSMUST00000093196 Copb2O55029 905 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Wipf3P0C7L0 485 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 PlaurP35456 327 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Slc45a2P58355 530 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Atp8a2P98200 1148 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Shisa3Q3UPR0 238 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Nacc1Q7TSZ8 514 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Phc3Q8CHP6 981 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Fermt2Q8CIB5 680 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Dync1li1Q8R1Q8 523 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Ddx1Q91VR5 740 aaKnown RBP13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Atoh8Q99NA2 322 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Fam84aQ9D650 292 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Mbtps1Q9WTZ2 1052 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Ccne2Q9Z238 404 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Adgra3Q7TT36 1310 aa13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Cep192E9Q4Y4 2514 aaKnown RBP13.02□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 TrrapQ80YV3 2565 aaKnown RBP13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Olfr663A0A1B0GSI9 319 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Gnai1B2RSH2 354 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Ppm1aP49443 382 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Arhgap39P59281 1107 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Itpripl2Q3UV16 535 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Mcph1Q7TT79 822 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Suz12Q80U70 741 aaKnown RBP13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Pgrmc2Q80UU9 217 aaKnown RBP13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Zbtb24Q80X44 710 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Ano1Q8BHY3 960 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Zmym6Q8BS54 1249 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Gm5591Q8CDK1 855 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Plagl2Q925T4 496 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Polr3kQ9CQZ7 108 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Gnai3Q9DC51 354 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Actr10Q9QZB7 417 aa13.01□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Myh3P13541 1940 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Col20a1Q923P0 1320 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Camk4P08414 469 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Gpr25P0C5I1 358 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Sept2P42208 361 aaKnown RBP13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Stat5bP42232 786 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Atp2b3Q0VF55 1220 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Pls1Q3V0K9 630 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Taf1cQ6PDZ2 836 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Slc2a12Q8BFW9 622 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Serinc2Q8K0E7 450 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Olfr1494Q8VGP8 315 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 GhdcQ99J23 532 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Polg2Q9QZM2 459 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Prkab1Q9R078 270 aa13□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Plxna4Q80UG2 1893 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Wdr19Q3UGF1 1341 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Akap17bA2A3V1 959 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Gm5878E9PUB3 99 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 C6E9Q6D8 931 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Gm28038F7BCN9 126 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Atp9aO70228 1047 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Yme1l1O88967 715 aaKnown RBP12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Etaa1Q5SVT3 877 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Mapre3Q6PER3 281 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Kif18bQ6PFD6 834 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Tmem169Q8BG50 297 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Fbxo28Q8BIG4 368 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Fam193aQ8CGI1 1231 aaKnown RBP12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Tbc1d23Q8K0F1 684 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 BaatQ91X34 420 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Pcdhac2Q91Y09 1006 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 2310003L06RikQ9CV82 495 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Polr3eQ9CZT4 710 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 SerhlQ9EPB5 311 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Dnaja2Q9QYJ0 412 aa12.99□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Cntnap2Q9CPW0 1332 aa12.98□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Ppp1r9aH3BJD6 1292 aa12.98□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Xrcc6P23475 608 aa12.98□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Dsg1bQ7TSF1 1060 aa12.98□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Ube3cQ80U95 1083 aa12.98□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 NcaphQ8C156 731 aa12.98□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 AdpgkQ8VDL4 496 aa12.98□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Ddah1Q9CWS0 285 aa12.98□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Plxna1P70206 1894 aa12.97□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Bod1lE9Q6J5 3032 aa12.97□□□□□ -0.33
Hmgb1-202ENSMUST00000093196 Kctd17E0CYQ0 296 aa12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms