RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C ADH1P00330 348 aaKnown RBP3.87□□□□□ -1.79
LSM6YDR378C EPT1P22140 391 aa3.87□□□□□ -1.79
LSM6YDR378C MRPS9P38120 278 aa3.87□□□□□ -1.79
LSM6YDR378C PES4P39684 611 aa3.87□□□□□ -1.79
LSM6YDR378C SEO1P39709 593 aa3.87□□□□□ -1.79
LSM6YDR378C UTP25P40498 721 aaKnown RBP3.87□□□□□ -1.79
LSM6YDR378C RMI1Q02685 241 aa3.87□□□□□ -1.79
LSM6YDR378C ABZ2Q03266 374 aa3.87□□□□□ -1.79
LSM6YDR378C CAB5Q03941 241 aa3.87□□□□□ -1.79
LSM6YDR378C BSC6Q08280 497 aa3.87□□□□□ -1.79
LSM6YDR378C SLF1Q12034 447 aaKnown RBP3.87□□□□□ -1.79
LSM6YDR378C GCD2P12754 651 aaPredicted RBP3.86□□□□□ -1.79
LSM6YDR378C CTA1P15202 515 aa3.86□□□□□ -1.79
LSM6YDR378C BGL2P15703 313 aaKnown RBP3.86□□□□□ -1.79
LSM6YDR378C MEI5P32489 222 aa3.86□□□□□ -1.79
LSM6YDR378C SWC5P38326 303 aa3.86□□□□□ -1.79
LSM6YDR378C YGR018CP53211 109 aa3.86□□□□□ -1.79
LSM6YDR378C YPQ1Q12010 308 aa3.86□□□□□ -1.79
LSM6YDR378C TAF10Q12030 206 aa3.86□□□□□ -1.79
LSM6YDR378C KTI12P34253 313 aaKnown RBP3.85□□□□□ -1.79
LSM6YDR378C SMF2P38778 549 aa3.85□□□□□ -1.79
LSM6YDR378C YFR018CP43599 363 aa3.85□□□□□ -1.79
LSM6YDR378C NRM1P53718 249 aa3.85□□□□□ -1.79
LSM6YDR378C STE2D6VTK4 431 aa3.84□□□□□ -1.79
LSM6YDR378C SPS19P32573 292 aaKnown RBP3.84□□□□□ -1.79
LSM6YDR378C ECM34P38728 170 aa3.84□□□□□ -1.79
LSM6YDR378C FHL1P39521 936 aa3.84□□□□□ -1.79
LSM6YDR378C ECM11Q04110 302 aa3.84□□□□□ -1.79
LSM6YDR378C REP1P03871 373 aa3.83□□□□□ -1.8
LSM6YDR378C SMP1P38128 452 aa3.83□□□□□ -1.8
LSM6YDR378C GGC1P38988 300 aa3.83□□□□□ -1.8
LSM6YDR378C MNN9P39107 395 aaKnown RBP3.83□□□□□ -1.8
LSM6YDR378C YFL012WP43580 148 aa3.83□□□□□ -1.8
LSM6YDR378C HIT1P46973 164 aa3.83□□□□□ -1.8
LSM6YDR378C RPN8Q08723 338 aaKnown RBP3.83□□□□□ -1.8
LSM6YDR378C SAM4Q08985 325 aaKnown RBP3.83□□□□□ -1.8
LSM6YDR378C YPR1Q12458 312 aa3.83□□□□□ -1.8
LSM6YDR378C MHP1P43638 1398 aa3.83□□□□□ -1.8
LSM6YDR378C BUD2P33314 1104 aa3.82□□□□□ -1.8
LSM6YDR378C EFM1P38732 585 aa3.82□□□□□ -1.8
LSM6YDR378C CHL4P38907 458 aa3.82□□□□□ -1.8
LSM6YDR378C SCS7Q03529 384 aa3.82□□□□□ -1.8
LSM6YDR378C DTD1Q07648 150 aaKnown RBP3.82□□□□□ -1.8
LSM6YDR378C MMT2Q08970 484 aa3.82□□□□□ -1.8
LSM6YDR378C PAA1Q12447 191 aaKnown RBP3.82□□□□□ -1.8
LSM6YDR378C TPI1P00942 248 aaKnown RBP3.81□□□□□ -1.8
LSM6YDR378C SAR1P20606 190 aaKnown RBP3.81□□□□□ -1.8
LSM6YDR378C INA22P40576 216 aa3.81□□□□□ -1.8
LSM6YDR378C VOA1P53262 265 aa3.81□□□□□ -1.8
LSM6YDR378C IRC4Q03036 179 aa3.81□□□□□ -1.8
LSM6YDR378C FAR10Q06001 478 aa3.81□□□□□ -1.8
LSM6YDR378C MRX9Q07349 420 aaKnown RBP3.81□□□□□ -1.8
LSM6YDR378C RDL2Q08742 149 aaKnown RBP3.81□□□□□ -1.8
LSM6YDR378C SAL1D6W196 494 aa3.8□□□□□ -1.8
LSM6YDR378C PUT4P15380 627 aa3.8□□□□□ -1.8
LSM6YDR378C FET3P38993 636 aa3.8□□□□□ -1.8
LSM6YDR378C YER184CP39961 794 aa3.8□□□□□ -1.8
LSM6YDR378C RRT13P40042 185 aa3.8□□□□□ -1.8
LSM6YDR378C RIB4P50861 169 aaPredicted RBP3.8□□□□□ -1.8
LSM6YDR378C FLC3P53121 802 aa3.8□□□□□ -1.8
LSM6YDR378C API2Q04413 109 aa3.8□□□□□ -1.8
LSM6YDR378C CUR1Q06469 252 aa3.8□□□□□ -1.8
LSM6YDR378C PRM4Q12498 284 aa3.8□□□□□ -1.8
LSM6YDR378C DCP1Q12517 231 aaPredicted RBP3.8□□□□□ -1.8
LSM6YDR378C RPS19AP07280 144 aaKnown RBP3.79□□□□□ -1.8
LSM6YDR378C RPS19BP07281 144 aaPredicted RBP3.79□□□□□ -1.8
LSM6YDR378C CAR2P07991 424 aaKnown RBP3.79□□□□□ -1.8
LSM6YDR378C MSS116P15424 664 aaKnown RBP3.79□□□□□ -1.8
LSM6YDR378C ZRT1P32804 376 aa3.79□□□□□ -1.8
LSM6YDR378C TAE1P38340 232 aa3.79□□□□□ -1.8
LSM6YDR378C LOH1P47055 219 aa3.79□□□□□ -1.8
LSM6YDR378C DBP6P53734 629 aaKnown RBP3.79□□□□□ -1.8
LSM6YDR378C ARP5P53946 755 aa3.79□□□□□ -1.8
LSM6YDR378C SED5Q01590 340 aa3.79□□□□□ -1.8
LSM6YDR378C YLR012CQ07927 99 aa3.79□□□□□ -1.8
LSM6YDR378C SPS100P13130 326 aa3.78□□□□□ -1.8
LSM6YDR378C ERD1P16151 362 aa3.78□□□□□ -1.8
LSM6YDR378C CBF5P33322 483 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
LSM6YDR378C YKL162CP36052 402 aa3.78□□□□□ -1.8
LSM6YDR378C DTR1P38125 572 aa3.78□□□□□ -1.8
LSM6YDR378C YHR035WP38769 630 aa3.78□□□□□ -1.8
LSM6YDR378C YPL080CQ02826 108 aa3.78□□□□□ -1.8
LSM6YDR378C RAX2Q12465 1220 aa3.78□□□□□ -1.8
LSM6YDR378C YBL111CQ3E7Y5 667 aa3.78□□□□□ -1.8
LSM6YDR378C ZIP1P31111 875 aa3.77□□□□□ -1.81
LSM6YDR378C PMT4P46971 762 aa3.77□□□□□ -1.81
LSM6YDR378C TPC1P53257 314 aa3.77□□□□□ -1.81
LSM6YDR378C OKP1P53298 406 aa3.77□□□□□ -1.81
LSM6YDR378C YOL029CQ08187 201 aa3.77□□□□□ -1.81
LSM6YDR378C TIR4Q12218 487 aaPredicted RBP3.77□□□□□ -1.81
LSM6YDR378C PFK27Q12471 397 aaPredicted RBP3.77□□□□□ -1.81
LSM6YDR378C TIP20P33891 701 aa3.76□□□□□ -1.81
LSM6YDR378C COQ5P49017 307 aa3.76□□□□□ -1.81
LSM6YDR378C UBX2Q04228 584 aa3.76□□□□□ -1.81
LSM6YDR378C RRG8Q06109 277 aa3.76□□□□□ -1.81
LSM6YDR378C VAC14Q06708 880 aa3.76□□□□□ -1.81
LSM6YDR378C PBP4Q07362 185 aaKnown RBP3.76□□□□□ -1.81
LSM6YDR378C YAL067W-AQ8TGK6 75 aa3.76□□□□□ -1.81
LSM6YDR378C DAL80P26343 269 aa3.75□□□□□ -1.81
LSM6YDR378C RAD23P32628 398 aaKnown RBP3.75□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 20.6 ms