RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 CSRP2Q16527 193 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 SLC44A4Q53GD3 710 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 IFIT1BQ5T764 474 aaKnown RBP12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 UNQ6494/PRO21346Q6UXR6 183 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 TMEM173Q86WV6 379 aaPredicted RBP12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 PI4K2BQ8TCG2 481 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 NELL2Q99435 816 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 MRPL17Q9NRX2 175 aaKnown RBP12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 SLC9A2Q9UBY0 812 aa12.58□□□□□ -0.4
PTP4A1-207ENST00000639568 FNDC1Q4ZHG4 1894 aaPredicted RBP12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 CACNA1IQ9P0X4 2223 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 FLNBO75369 2602 aaKnown RBP12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 C1QTNF9BB2RNN3 333 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 ANHXE9PGG2 379 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 INPPL1O15357 1258 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 MAFGO15525 162 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 GDF9O60383 454 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 C1QTNF9P0C862 333 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 SLC26A2P50443 739 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 WTAPQ15007 396 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 LRSAM1Q6UWE0 723 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 RSPO2Q6UXX9 243 aaPredicted RBP12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 GET4Q7L5D6 327 aaPredicted RBP12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 ST13P5Q8NFI4 369 aaPredicted RBP12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 RSPH1Q8WYR4 309 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 DDX23Q9BUQ8 820 aaKnown RBP12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 RHOBTB2Q9BYZ6 727 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 MAD2L2Q9UI95 211 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 KAT6AQ92794 2004 aa12.57□□□□□ -0.4
PTP4A1-207ENST00000639568 FANCMQ8IYD8 2048 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 A0A0U1RQF3 1178 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 HBP1O60381 514 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 ADH1AP07327 375 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 MYBP10242 640 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 ITGB5P18084 799 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 CD72P21854 359 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 PFKPQ01813 784 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 USP17L6PQ6QN14 398 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 METTL13Q8N6R0 699 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 SDF4Q9BRK5 362 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 LTB4R2Q9NPC1 389 aa12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 ZFP37Q9Y6Q3 630 aaPredicted RBP12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 GCN1Q92616 2671 aaKnown RBP12.56□□□□□ -0.4
PTP4A1-207ENST00000639568 B4E1Z4 1266 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 C2CD2LO14523 706 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 BACH1O14867 736 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 GLUD1P00367 558 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 VTNP04004 478 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 RPS9P46781 194 aaKnown RBP12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 ACTR2P61160 394 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 AASDHQ4L235 1098 aaPredicted RBP12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 KDF1Q8NAX2 398 aaPredicted RBP12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 EVI5LQ96CN4 794 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 FAM227BQ96M60 508 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 GBP3Q9H0R5 595 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 RIOX1Q9H6W3 641 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 PRMT8Q9NR22 394 aaPredicted RBP12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 DACT1Q9NYF0 836 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 ZSWIM5Q9P217 1185 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 LHX6Q9UPM6 363 aa12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 MRPS17Q9Y2R5 130 aaKnown RBP12.55□□□□□ -0.4
PTP4A1-207ENST00000639568 PALM3A6NDB9 673 aaPredicted RBP12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 GPR32O75388 356 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 RFPL2O75678 378 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 GALTP07902 379 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 AK2P54819 239 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 SIM2Q14190 667 aaPredicted RBP12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 ZNF484Q5JVG2 852 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 FAM160B1Q5W0V3 765 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 GLB1LQ6UWU2 654 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 BCL7CQ8WUZ0 217 aaPredicted RBP12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 CLDN23Q96B33 292 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 RPP25Q9BUL9 199 aaKnown RBP12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 DCTPP1Q9H773 170 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 FAM217BQ9NTX9 383 aaPredicted RBP12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 SSX2IPQ9Y2D8 614 aa12.54□□□□□ -0.4
PTP4A1-207ENST00000639568 DENND4AQ7Z401 1863 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 A0A0D9SFI3 127 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 TMEM8BA6NDV4 472 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 PIK3CDO00329 1044 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 URODP06132 367 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 MX1P20591 662 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 EIF4BP23588 611 aaKnown RBP12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 MFAP1P55081 439 aaKnown RBP12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 NLRP11P59045 1033 aaKnown RBP12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 RING1Q06587 406 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 MTAPQ13126 283 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 PARM1Q6UWI2 310 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 ZNF852Q6ZMS4 543 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 MTSS1LQ765P7 747 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 ZNF598Q86UK7 904 aaKnown RBP12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 CKAP2LQ8IYA6 745 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 C12orf50Q8NA57 414 aaPredicted RBP12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 FGF14Q92915 247 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 SCLT1Q96NL6 688 aa12.53□□□□□ -0.4
PTP4A1-207ENST00000639568 KRT23Q9C075 422 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms