RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 IL17AQ16552 155 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 CABP7Q86V35 215 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 FIBCD1Q8N539 461 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 KCTD17Q8N5Z5 321 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 ARNTL2Q8WYA1 636 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 ZNF396Q96N95 335 aaPredicted RBP18.9■□□□□ 0.62
LIN28B-202ENST00000635857 XPNPEP1Q9NQW7 623 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 CHST12Q9NRB3 414 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 PIN4Q9Y237 131 aaKnown RBP18.9■□□□□ 0.62
LIN28B-202ENST00000635857 SZT2Q5T011 3432 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 ADGRA3Q8IWK6 1321 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 MYH15Q9Y2K3 1946 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 TTC3P53804 2025 aa18.9■□□□□ 0.62
LIN28B-202ENST00000635857 COL4A6Q14031 1691 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 LINC01553A4QN01 128 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 RBAK-RBAKDNI3L0D1 243 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 HOXA2O43364 376 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 SLC26A4O43511 780 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 MGEA5O60502 916 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 CSDE1O75534 798 aaKnown RBP18.89■□□□□ 0.61
LIN28B-202ENST00000635857 EYA4O95677 639 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 CDC25AP30304 524 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 TXLNAP40222 546 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 BTG3Q14201 252 aaPredicted RBP18.89■□□□□ 0.61
LIN28B-202ENST00000635857 PPP2R5AQ15172 486 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 PCBP1Q15365 356 aaKnown RBP eCLIP18.89■□□□□ 0.61
LIN28B-202ENST00000635857 TWF2Q6IBS0 349 aaKnown RBP18.89■□□□□ 0.61
LIN28B-202ENST00000635857 RTN4RL1Q86UN2 441 aaPredicted RBP18.89■□□□□ 0.61
LIN28B-202ENST00000635857 ZBTB8OSQ8IWT0 167 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 SAMD11Q96NU1 681 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 CERS4Q9HA82 394 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 MTUS1Q9ULD2 1270 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 RWDD3Q9Y3V2 267 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 CLIC4Q9Y696 253 aa18.89■□□□□ 0.61
LIN28B-202ENST00000635857 LRRIQ4A6NIV6 560 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 INO80B-WBP1J3KQ70 363 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 GTPBP6O43824 516 aaPredicted RBP18.88■□□□□ 0.61
LIN28B-202ENST00000635857 SSBP05455 408 aaKnown RBP eCLIP18.88■□□□□ 0.61
LIN28B-202ENST00000635857 SKIP12755 728 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 CYP11B2P19099 503 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 IGFBP4P22692 258 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 FOXD4L5Q5VV16 416 aaPredicted RBP18.88■□□□□ 0.61
LIN28B-202ENST00000635857 FAM173BQ6P4H8 233 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 ABI1Q8IZP0 508 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 SP7Q8TDD2 431 aaPredicted RBP18.88■□□□□ 0.61
LIN28B-202ENST00000635857 FOXD4L4Q8WXT5 416 aaPredicted RBP18.88■□□□□ 0.61
LIN28B-202ENST00000635857 IFT74Q96LB3 600 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 ELAC1Q9H777 363 aaKnown RBP18.88■□□□□ 0.61
LIN28B-202ENST00000635857 IFT122Q9HBG6 1241 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 TMEM161AQ9NX61 479 aa18.88■□□□□ 0.61
LIN28B-202ENST00000635857 C9IYK1 514 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 E9PMD0 336 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 DGKIO75912 1065 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 ZSCAN22P10073 491 aaPredicted RBP18.87■□□□□ 0.61
LIN28B-202ENST00000635857 ARL2P36404 184 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 RAB27AP51159 221 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 POU5F1BQ06416 359 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 CAPSQ13938 189 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 STK38Q15208 465 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 ECM1Q16610 540 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 CMTR2Q8IYT2 770 aaKnown RBP18.87■□□□□ 0.61
LIN28B-202ENST00000635857 RNF169Q8NCN4 708 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 ASAP3Q8TDY4 903 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 KIFAP3Q92845 792 aa18.87■□□□□ 0.61
LIN28B-202ENST00000635857 RALGAPA2Q2PPJ7 1873 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 NLRC5Q86WI3 1866 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 MARCKSP29966 332 aaPredicted RBP18.86■□□□□ 0.61
LIN28B-202ENST00000635857 ERVK-21P61565 698 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 DSC3Q14574 896 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 PAN2Q504Q3 1202 aaKnown RBP18.86■□□□□ 0.61
LIN28B-202ENST00000635857 FBXO22Q8NEZ5 403 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 DEPTORQ8TB45 409 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 PLIN2Q99541 437 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 MMTAG2Q9BU76 263 aaKnown RBP18.86■□□□□ 0.61
LIN28B-202ENST00000635857 C2orf40Q9H1Z8 148 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 GPRC5CQ9NQ84 441 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 AGPAT5Q9NUQ2 364 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 CCDC39Q9UFE4 941 aa18.86■□□□□ 0.61
LIN28B-202ENST00000635857 F13A1P00488 732 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 GLRA2P23416 452 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 AXLP30530 894 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 PTENP60484 403 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 TMEM132AQ24JP5 1023 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 HYIQ5T013 277 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 SPOUT1Q5T280 376 aaKnown RBP18.85■□□□□ 0.61
LIN28B-202ENST00000635857 DRC1Q96MC2 740 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 USP28Q96RU2 1077 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 TIPINQ9BVW5 301 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 NFKBIZQ9BYH8 718 aa18.85■□□□□ 0.61
LIN28B-202ENST00000635857 A0A0U1RQF3 1178 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 TBKBP1A7MCY6 615 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 ARHGEF15O94989 841 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 EOMESO95936 686 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 CTNNB1P35222 781 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 NAMPTP43490 491 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 PTPAQ15257 358 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 NOTUMQ6P988 496 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 ECHDC2Q86YB7 292 aa18.84■□□□□ 0.61
LIN28B-202ENST00000635857 IFNLR1Q8IU57 520 aaPredicted RBP18.84■□□□□ 0.61
LIN28B-202ENST00000635857 KRI1Q8N9T8 703 aaKnown RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms