RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PIP4K2CQ8TBX8 421 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 URGCPQ8TCY9 931 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SH3TC2Q8TF17 1288 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 STRBPQ96SI9 672 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 ADAM22Q9P0K1 906 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 UTYO14607 1347 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SPDYE2BA6NHP3 402 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 H3BRJ5 948 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 GOLGA8MH3BSY2 632 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SPDYE6P0CI01 402 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 PMS2P54278 862 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ROR1Q01973 937 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ARHGAP27Q6ZUM4 889 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 TRIM59Q8IWR1 403 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 DHX40Q8IX18 779 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 BEST2Q8NFU1 509 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 PARD3BQ8TEW8 1205 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ZNF341Q9BYN7 854 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 EDEM3Q9BZQ6 932 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 KIF17Q9P2E2 1029 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 COL15A1P39059 1388 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 PIK3R2O00459 728 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 CD58P19256 250 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 KCNA4P22459 653 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 KCNJ6P48051 423 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 DYNC1I2Q13409 638 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 YY1AP1Q9H869 796 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 PIH1D3Q9NQM4 214 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 KRT82Q9NSB4 513 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 GINM1Q9NU53 330 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SUGT1Q9Y2Z0 365 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 PRKAB2O43741 272 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SLC1A1P43005 524 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 CTTNQ14247 550 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 TRIP13Q15645 432 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 UBE2SQ16763 222 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 DALRD3Q5D0E6 543 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 SCARA5Q6ZMJ2 495 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ZC3H18Q86VM9 953 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 ATP11CQ8NB49 1132 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ZNF564Q8TBZ8 553 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 FAM129AQ9BZQ8 928 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 TAF1DQ9H5J8 278 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 ZBTB1Q9Y2K1 713 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 MROH7-TTC4A0A0A0MT08 1334 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 INO80Q9ULG1 1556 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 TSPY1Q01534 308 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 KCNB1Q14721 858 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ARHGAP18Q8N392 663 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 MASTLQ96GX5 879 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 BARHL2Q9NY43 387 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 H7C1W4 665 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 PLEKHA8P1O95397 391 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 FDX1P10109 184 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ADRA2BP18089 450 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SCP2P22307 547 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 ATP6V1E1P36543 226 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 PEX19P40855 299 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 EPHB1P54762 984 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 HDAC4P56524 1084 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SLC12A1Q13621 1099 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 LRRC23Q53EV4 343 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 TMCO4Q5TGY1 634 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 RCSD1Q6JBY9 416 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 RWDD4Q6NW29 188 aaKnown RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 CLEC17AQ6ZS10 378 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 SH3RF3Q8TEJ3 882 aaPredicted RBP4.87□□□□□ -1.63
CHD9-221ENST00000615216 STOML1Q9UBI4 398 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 DIP2AQ14689 1571 aa4.87□□□□□ -1.63
CHD9-221ENST00000615216 LMTK2Q8IWU2 1503 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 LRRC53A6NM62 1247 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 TRPA1O75762 1119 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 USP11P51784 963 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 UBXN2AP68543 259 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 CACNB1Q02641 598 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 APOBEC3FQ8IUX4 373 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 EFHBQ8N7U6 833 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 TSC22D3Q99576 134 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 KCND2Q9NZV8 630 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 CNOT8Q9UFF9 292 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 STAP1Q9ULZ2 295 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PCDHA6Q9UN73 950 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 PCDHA8Q9Y5H6 950 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 FRMD3A2A2Y4 597 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 ZNF18P17022 549 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 VAMP7P51809 220 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 LAMB3Q13751 1172 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 MORF4L2Q15014 288 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 SPDYE1Q8NFV5 336 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 GFM2Q969S9 779 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 IFT43Q96FT9 208 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 TGS1Q96RS0 853 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 KIF2CQ99661 725 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 FTOQ9C0B1 505 aaKnown RBP eCLIP4.86□□□□□ -1.63
CHD9-221ENST00000615216 TUFT1Q9NNX1 390 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 SEC31BQ9NQW1 1179 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 OLA1Q9NTK5 396 aaKnown RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 KLHL8Q9P2G9 620 aaPredicted RBP4.86□□□□□ -1.63
CHD9-221ENST00000615216 MRFAP1Q9Y605 127 aa4.86□□□□□ -1.63
CHD9-221ENST00000615216 CLRN2A0PK11 232 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms