RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 EMSYQ7Z589 1322 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 EPHA7Q15375 998 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 KRT39Q6A163 491 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 CDC42EP5Q6NZY7 148 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 ADSSL1Q8N142 457 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 PYROXD1Q8WU10 500 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 TMEM60Q9H2L4 133 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 PXDNLA1KZ92 1463 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 GRIN1Q05586 938 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 MUM1Q2TAK8 710 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 PHLDB3Q6NSJ2 640 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 RHPN2Q8IUC4 686 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 GDAP1Q8TB36 358 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 RNF25Q96BH1 459 aaPredicted RBP13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 INTS2Q9H0H0 1204 aaKnown RBP13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 EYA4O95677 639 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 SLC4A1P02730 911 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 PDHBP11177 359 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 ASPHQ12797 758 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 VPS72Q15906 364 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 PCGF5Q86SE9 256 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 SCYL3Q8IZE3 742 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 ARMC2Q8NEN0 867 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.4□□□□□ -0.268e-12■■■■□ 20.4
TNFAIP3-206ENST00000612899 CCHCR1Q8TD31 782 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 ACAD9Q9H845 621 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 ADAM21Q9UKJ8 722 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 HPS5Q9UPZ3 1129 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 PLAAQ9Y263 795 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 PCDHA10Q9Y5I2 948 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 SYNGAP1Q96PV0 1343 aa13.4□□□□□ -0.26
TNFAIP3-206ENST00000612899 PODXLO00592 558 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 PPP1R12AO14974 1030 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 CSPG5O95196 566 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 DPYDQ12882 1025 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 E4F1Q66K89 784 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 TRIM68Q6AZZ1 485 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 DSTYKQ6XUX3 929 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 MTRQ99707 1265 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 KCNF1Q9H3M0 494 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 RPAP3Q9H6T3 665 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 ZCCHC17Q9NP64 241 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 GINM1Q9NU53 330 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 TUBE1Q9UJT0 475 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 CAPN11Q9UMQ6 739 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 UBE2Q2LH0YL09 131 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 EIF3BP55884 814 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 PDCLQ13371 301 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 KIAA1841Q6NSI8 718 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 ZMAT2Q96NC0 199 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 CD163L1Q9NR16 1453 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 DIP2CQ9Y2E4 1556 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 A0A1B0GTH6 734 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 KLRK1P26718 216 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 GLE1Q53GS7 698 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 SKA2Q8WVK7 121 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 BCAP29Q9UHQ4 241 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 ATP1A1P05023 1023 aaKnown RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 CENPUQ71F23 418 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 BBS5Q8N3I7 341 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 ZNF564Q8TBZ8 553 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 KLHL29Q96CT2 875 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 HDAC11Q96DB2 347 aa13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 POLR3FQ9H1D9 316 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 TTC7AQ9ULT0 858 aaPredicted RBP13.39□□□□□ -0.27
TNFAIP3-206ENST00000612899 MYMKA6NI61 221 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 SART1O43290 800 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 TJP3O95049 919 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 LMBRD2Q68DH5 695 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 N4BP2L2Q92802 583 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 LIMA1Q9UHB6 759 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 IQSEC2Q5JU85 1478 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 ANKRD65E5RJM6 399 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 PFDN6O15212 129 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 LUC7L3O95232 432 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 TROAPQ12815 778 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 SEMA3FQ13275 785 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 C16orf86Q6ZW13 317 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 GIMAP8Q8ND71 665 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 AGPAT5Q9NUQ2 364 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 PCSK1NQ9UHG2 260 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 IRX4P78413 519 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 MTMR2Q13614 643 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 PDXDC1Q6P996 788 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 EP400NLQ6ZTU2 488 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 NUP85Q9BW27 656 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 CNOT10Q9H9A5 744 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 SAYSD1Q9NPB0 183 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 IPO11Q9UI26 975 aaKnown RBP13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 CNTNAP5Q8WYK1 1306 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 JCADQ9P266 1359 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 HMGB1P1B2RPK0 211 aaPredicted RBP13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 STXBP3O00186 592 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 PDXKO00764 312 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 SRGAP2BP0DMP2 458 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 PHKA2P46019 1235 aa13.38□□□□□ -0.27
TNFAIP3-206ENST00000612899 CCZ1BP86790 482 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms