RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 RPLP2P05387 115 aaKnown RBP20.47■□□□□ 0.87
SSBP4-212ENST00000601919 GLRA2P23416 452 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 NMT1P30419 496 aaKnown RBP20.47■□□□□ 0.87
SSBP4-212ENST00000601919 IQCB1Q15051 598 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 TPD52L1Q16890 204 aaPredicted RBP20.47■□□□□ 0.87
SSBP4-212ENST00000601919 UVSSAQ2YD98 709 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 NBPF20Q3BBV1 942 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 FOXR2Q6PJQ5 311 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 HAUS6Q7Z4H7 955 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 SESTD1Q86VW0 696 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 ZNF710Q8N1W2 664 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 LRRC71Q8N4P6 559 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 AOPEPQ8N6M6 819 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 DEPTORQ8TB45 409 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 ZNF507Q8TCN5 953 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 SCFD1Q8WVM8 642 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 PRPF31Q8WWY3 499 aaKnown RBP20.47■□□□□ 0.87
SSBP4-212ENST00000601919 ARMC5Q96C12 935 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 DEFB118Q96PH6 123 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 FIZ1Q96SL8 496 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 SEZ6LQ9BYH1 1024 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 HDAC6Q9UBN7 1215 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 EXOC7Q9UPT5 735 aa20.47■□□□□ 0.87
SSBP4-212ENST00000601919 FSD2A1L4K1 749 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 LRRIQ4A6NIV6 560 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 DNM1LO00429 736 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 SLC16A4O15374 487 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 MYBP10242 640 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 HOXC8P31273 242 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 CLCN3P51790 818 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 GTF2BQ00403 316 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 LRRC63Q05C16 580 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 PTPN11Q06124 597 aaPredicted RBP20.46■□□□□ 0.87
SSBP4-212ENST00000601919 LAMTOR4Q0VGL1 99 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 MTFR1Q15390 333 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 KNOP1Q1ED39 458 aaKnown RBP20.46■□□□□ 0.87
SSBP4-212ENST00000601919 MARCH8Q5T0T0 291 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 CENPPQ6IPU0 288 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 PPP4R3CPQ6ZMV5 832 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 LUZP1Q86V48 1076 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 DHX40Q8IX18 779 aaKnown RBP20.46■□□□□ 0.87
SSBP4-212ENST00000601919 ASAP3Q8TDY4 903 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 BSNDQ8WZ55 320 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 KCNN1Q92952 543 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 ZNF333Q96JL9 665 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 ACCSQ96QU6 501 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 C2orf40Q9H1Z8 148 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 TMEM206Q9H813 350 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 GTF2IRD1Q9UHL9 959 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 AKT3Q9Y243 479 aa20.46■□□□□ 0.87
SSBP4-212ENST00000601919 SMIM35A0A1B0GVV1 85 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 PPP1R37O75864 691 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 PRPF6O94906 941 aaKnown RBP20.45■□□□□ 0.86
SSBP4-212ENST00000601919 FGFR1OPO95684 399 aaKnown RBP20.45■□□□□ 0.86
SSBP4-212ENST00000601919 CYP2C9P11712 490 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 CASP5P51878 434 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 EFNA5P52803 228 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 ADAM17P78536 824 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 POU5F1BQ06416 359 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 MKRN4PQ13434 485 aaPredicted RBP20.45■□□□□ 0.86
SSBP4-212ENST00000601919 FAM47CQ5HY64 1035 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 SPATA1Q5VX52 437 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 TAF2Q6P1X5 1199 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 RHPN2Q8IUC4 686 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 ZBTB8OSQ8IWT0 167 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 LINC01465Q8N7H1 131 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 TMEM161BQ8NDZ6 487 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 GLIS3Q8NEA6 775 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 GOLGA5Q8TBA6 731 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 STRA6Q9BX79 667 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 FGFBP2Q9BYJ0 223 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 PRDM10Q9NQV6 1147 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 OGDHLQ9ULD0 1010 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 PHF24Q9UPV7 400 aa20.45■□□□□ 0.86
SSBP4-212ENST00000601919 DENND3A2RUS2 1198 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 CALUO43852 315 aaPredicted RBP20.44■□□□□ 0.86
SSBP4-212ENST00000601919 MYCP01106 439 aaPredicted RBP20.44■□□□□ 0.86
SSBP4-212ENST00000601919 CAPN2P17655 700 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 MRE11P49959 708 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 STX17P56962 302 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 STRN3Q13033 797 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 DRP2Q13474 957 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 ITGA7Q13683 1181 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 HS2ST1Q7LGA3 356 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 NELFCDQ8IXH7 590 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 SYCP3Q8IZU3 236 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 NME8Q8N427 588 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 NOC3LQ8WTT2 800 aaKnown RBP20.44■□□□□ 0.86
SSBP4-212ENST00000601919 GRPEL1Q9HAV7 217 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 CGNQ9P2M7 1197 aaKnown RBP20.44■□□□□ 0.86
SSBP4-212ENST00000601919 ARHGAP28Q9P2N2 729 aa20.44■□□□□ 0.86
SSBP4-212ENST00000601919 TRIP12Q14669 1992 aaPredicted RBP20.44■□□□□ 0.86
SSBP4-212ENST00000601919 PDXKO00764 312 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 SRGAP2CP0DJJ0 459 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 PHKA2P46019 1235 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 SNRPFP62306 86 aaKnown RBP20.43■□□□□ 0.86
SSBP4-212ENST00000601919 CAPSQ13938 189 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 ZC2HC1CQ53FD0 456 aaPredicted RBP20.43■□□□□ 0.86
SSBP4-212ENST00000601919 RSPH3Q86UC2 560 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 RNF149Q8NC42 400 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms