RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 DNM1Q05193 864 aaKnown RBP22.29■■□□□ 1.16
SSBP4-210ENST00000601444 RAB30Q15771 203 aa22.29■■□□□ 1.16
SSBP4-210ENST00000601444 GPR153Q6NV75 609 aa22.29■■□□□ 1.16
SSBP4-210ENST00000601444 CDK5RAP3Q96JB5 506 aa22.29■■□□□ 1.16
SSBP4-210ENST00000601444 ADAM2Q99965 735 aa22.29■■□□□ 1.16
SSBP4-210ENST00000601444 FTHL17Q9BXU8 183 aa22.29■■□□□ 1.16
SSBP4-210ENST00000601444 TSPYL2Q9H2G4 693 aaPredicted RBP22.29■■□□□ 1.16
SSBP4-210ENST00000601444 ASAP2O43150 1006 aa22.28■■□□□ 1.16
SSBP4-210ENST00000601444 CA3P07451 260 aa22.28■■□□□ 1.16
SSBP4-210ENST00000601444 IBSPP21815 317 aaPredicted RBP22.28■■□□□ 1.16
SSBP4-210ENST00000601444 CAPSQ13938 189 aa22.28■■□□□ 1.16
SSBP4-210ENST00000601444 DSC3Q14574 896 aa22.28■■□□□ 1.16
SSBP4-210ENST00000601444 MXD4Q14582 209 aaPredicted RBP22.28■■□□□ 1.16
SSBP4-210ENST00000601444 KRI1Q8N9T8 703 aaKnown RBP22.28■■□□□ 1.16
SSBP4-210ENST00000601444 MCPH1Q8NEM0 835 aa22.28■■□□□ 1.16
SSBP4-210ENST00000601444 SYMPKQ92797 1274 aaKnown RBP22.28■■□□□ 1.16
SSBP4-210ENST00000601444 RUSC1Q9BVN2 902 aa22.28■■□□□ 1.16
SSBP4-210ENST00000601444 NT5C3AQ9H0P0 336 aa22.28■■□□□ 1.16
SSBP4-210ENST00000601444 MORC2Q9Y6X9 1032 aaPredicted RBP22.28■■□□□ 1.16
SSBP4-210ENST00000601444 GBF1Q92538 1859 aa22.28■■□□□ 1.16
SSBP4-210ENST00000601444 SPTLC2O15270 562 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 PLCG1P19174 1290 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 ODR4Q5SWX8 454 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 RINT1Q6NUQ1 792 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 DEFB123Q8N688 67 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 BSNDQ8WZ55 320 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 CALML4Q96GE6 196 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 CCSER1Q9C0I3 900 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 SEMA6BQ9H3T3 888 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 RGS18Q9NS28 235 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 MYH15Q9Y2K3 1946 aa22.27■■□□□ 1.16
SSBP4-210ENST00000601444 DENND3A2RUS2 1198 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 YEATS4O95619 227 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 SSBP05455 408 aaKnown RBP eCLIP22.26■■□□□ 1.15
SSBP4-210ENST00000601444 PLA2G4BP0C869 781 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 SLC12A3P55017 1021 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 ZNF697Q5TEC3 545 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 C1orf186Q6ZWK4 172 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 SPRED2Q7Z698 418 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 CRIPAKQ8N1N5 446 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 SYT2Q8N9I0 419 aaPredicted RBP22.26■■□□□ 1.15
SSBP4-210ENST00000601444 RAD9AQ99638 391 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 ZNF576Q9H609 170 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 BLOC1S4Q9NUP1 217 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 CHD9Q3L8U1 2897 aa22.26■■□□□ 1.15
SSBP4-210ENST00000601444 PPP6R2O75170 966 aa22.25■■□□□ 1.15
SSBP4-210ENST00000601444 PTENP60484 403 aa22.25■■□□□ 1.15
SSBP4-210ENST00000601444 HTRA4P83105 476 aaPredicted RBP22.25■■□□□ 1.15
SSBP4-210ENST00000601444 RAD51AP2Q09MP3 1159 aa22.25■■□□□ 1.15
SSBP4-210ENST00000601444 CATSPER4Q7RTX7 472 aa22.25■■□□□ 1.15
SSBP4-210ENST00000601444 SRGAP1Q7Z6B7 1085 aa22.25■■□□□ 1.15
SSBP4-210ENST00000601444 RASSF8Q8NHQ8 419 aa22.25■■□□□ 1.15
SSBP4-210ENST00000601444 INO80BQ9C086 356 aaPredicted RBP22.25■■□□□ 1.15
SSBP4-210ENST00000601444 SLC28A3Q9HAS3 691 aa22.25■■□□□ 1.15
SSBP4-210ENST00000601444 C9IYK1 514 aa22.24■■□□□ 1.15
SSBP4-210ENST00000601444 SLC26A4O43511 780 aa22.24■■□□□ 1.15
SSBP4-210ENST00000601444 SFPQP23246 707 aaKnown RBP eCLIP22.24■■□□□ 1.15
SSBP4-210ENST00000601444 DDIT3P35638 169 aa22.24■■□□□ 1.15
SSBP4-210ENST00000601444 PHKA2P46019 1235 aa22.24■■□□□ 1.15
SSBP4-210ENST00000601444 TFDP1Q14186 410 aa22.24■■□□□ 1.15
SSBP4-210ENST00000601444 DHX8Q14562 1220 aaKnown RBP22.24■■□□□ 1.15
SSBP4-210ENST00000601444 PPP2R2DQ66LE6 453 aa22.24■■□□□ 1.15
SSBP4-210ENST00000601444 DAW1Q8N136 415 aa22.24■■□□□ 1.15
SSBP4-210ENST00000601444 PANK2Q9BZ23 570 aa22.24■■□□□ 1.15
SSBP4-210ENST00000601444 NPHP3-ACAD11A0A0J9YXS1 232 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 LRRIQ4A6NIV6 560 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 SFI1A8K8P3 1242 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 HIP1RO75146 1068 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 ZSCAN20P17040 1043 aaPredicted RBP22.23■■□□□ 1.15
SSBP4-210ENST00000601444 SARSP49591 514 aaKnown RBP22.23■■□□□ 1.15
SSBP4-210ENST00000601444 GATMP50440 423 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 TAP1Q03518 808 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 MBTD1Q05BQ5 628 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 POU5F1BQ06416 359 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 MCM6Q14566 821 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 GRIN2CQ14957 1233 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 ARSHQ5FYA8 562 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 SLC24A5Q71RS6 500 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 KCTD17Q8N5Z5 321 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 YME1L1Q96TA2 773 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 CERS4Q9HA82 394 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 MTMR10Q9NXD2 777 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 PIN4Q9Y237 131 aaKnown RBP22.23■■□□□ 1.15
SSBP4-210ENST00000601444 INSL6Q9Y581 213 aa22.23■■□□□ 1.15
SSBP4-210ENST00000601444 A0A087X0B3 334 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 INO80B-WBP1J3KQ70 363 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 HOXA11P31270 313 aaPredicted RBP22.22■■□□□ 1.15
SSBP4-210ENST00000601444 FAM189BP81408 668 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 MAPK7Q13164 816 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 AXDND1Q5T1B0 1012 aaPredicted RBP22.22■■□□□ 1.15
SSBP4-210ENST00000601444 ATL3Q6DD88 541 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 IFNLR1Q8IU57 520 aaPredicted RBP22.22■■□□□ 1.15
SSBP4-210ENST00000601444 NPAS4Q8IUM7 802 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 RAD54LQ92698 747 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 KIFC3Q9BVG8 833 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 C1orf112Q9NSG2 853 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 RCOR1Q9UKL0 485 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 CFAP45Q9UL16 551 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 CDH23Q9H251 3354 aa22.22■■□□□ 1.15
SSBP4-210ENST00000601444 TMEM265A0A087WTH1 108 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms