RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ZNF623O75123 536 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 ITGB1P05556 798 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 FGFR1P11362 822 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 SKIP12755 728 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 FGFR4P22455 802 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 POU5F1BQ06416 359 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 LAMTOR4Q0VGL1 99 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 GNL2Q13823 731 aaKnown RBP11.74□□□□□ -0.53
CCDC9-203ENST00000596938 CAMK1Q14012 370 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 MXD4Q14582 209 aaPredicted RBP11.74□□□□□ -0.53
CCDC9-203ENST00000596938 ZNF174Q15697 407 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 CSPP1Q1MSJ5 1256 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 ZNF598Q86UK7 904 aaKnown RBP11.74□□□□□ -0.53
CCDC9-203ENST00000596938 C4orf32Q8N8J7 132 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 KLHL23Q8NBE8 558 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 ADAMTS19Q8TE59 1207 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 RSPH1Q8WYR4 309 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 TMEM143Q96AN5 459 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 TMX3Q96JJ7 454 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 TBC1D32Q96NH3 1257 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 CASD1Q96PB1 797 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 UBE2ZQ9H832 354 aaPredicted RBP11.74□□□□□ -0.53
CCDC9-203ENST00000596938 TUFT1Q9NNX1 390 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 ALG13Q9NP73 1137 aaKnown RBP11.74□□□□□ -0.53
CCDC9-203ENST00000596938 PCDHB12Q9Y5F1 795 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 SIP14410 1827 aa11.74□□□□□ -0.53
CCDC9-203ENST00000596938 DGAT1O75907 488 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 OR52Z1P0C646 297 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 SRGAP2CP0DJJ0 459 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 IBSPP21815 317 aaPredicted RBP11.73□□□□□ -0.53
CCDC9-203ENST00000596938 TECP42680 631 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 KCNQ1P51787 676 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 UBE3AQ05086 875 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 PDIA5Q14554 519 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 EMC2Q15006 297 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 PCBP1Q15365 356 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCDC9-203ENST00000596938 LEXMQ3ZCV2 418 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 TCEAL5Q5H9L2 206 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 TTC38Q5R3I4 469 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 CATSPER4Q7RTX7 472 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 FERMT3Q86UX7 667 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 CATSPER3Q86XQ3 398 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 PABPC5Q96DU9 382 aaKnown RBP11.73□□□□□ -0.53
CCDC9-203ENST00000596938 NLRP4Q96MN2 994 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 UHRF1Q96T88 793 aaPredicted RBP11.73□□□□□ -0.53
CCDC9-203ENST00000596938 MTRQ99707 1265 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 POLR3CQ9BUI4 534 aaPredicted RBP11.73□□□□□ -0.53
CCDC9-203ENST00000596938 CWH43Q9H720 699 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 RNF19AQ9NV58 838 aa11.73□□□□□ -0.53
CCDC9-203ENST00000596938 NOL7Q9UMY1 257 aaKnown RBP11.73□□□□□ -0.53
CCDC9-203ENST00000596938 POTEMA6NI47 508 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 TNFRSF10AO00220 468 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 LAG3P18627 525 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 MUTP22033 750 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 DNAJB1P25685 340 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 RPA1P27694 616 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 ARL2P36404 184 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 PHKA2P46019 1235 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 RARRES1P49788 294 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 TOB1P50616 345 aaPredicted RBP11.72□□□□□ -0.53
CCDC9-203ENST00000596938 CTC1Q2NKJ3 1217 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 SPOUT1Q5T280 376 aaKnown RBP11.72□□□□□ -0.53
CCDC9-203ENST00000596938 LRRC55Q6ZSA7 311 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 ABI1Q8IZP0 508 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 RNF149Q8NC42 400 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 ERMNQ8TAM6 284 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 PIGOQ8TEQ8 1089 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 POF1BQ8WVV4 589 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 NACC1Q96RE7 527 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 XPNPEP1Q9NQW7 623 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 DBR1Q9UK59 544 aaKnown RBP11.72□□□□□ -0.53
CCDC9-203ENST00000596938 TTC28Q96AY4 2481 aa11.72□□□□□ -0.53
CCDC9-203ENST00000596938 MED24O75448 989 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 FGF18O76093 207 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 CD2BP2O95400 341 aaKnown RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 ATF7P17544 494 aaPredicted RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 KCNA5P22460 613 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 HOXA11P31270 313 aaPredicted RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 FXR2P51116 673 aaKnown RBP eCLIP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 RAB27AP51159 221 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 PTENP60484 403 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 PLCB3Q01970 1234 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 TFDP1Q14186 410 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 PUS10Q3MIT2 529 aaKnown RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 CLLU1OSQ5K130 101 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 TWF2Q6IBS0 349 aaKnown RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 PDE12Q6L8Q7 609 aaKnown RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 MRPL10Q7Z7H8 261 aaKnown RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 LRRC43Q8N309 656 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 COLGALT1Q8NBJ5 622 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 PPP2R3CQ969Q6 453 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 NFKBIZQ9BYH8 718 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 MINDY3Q9H8M7 445 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 AGPAT5Q9NUQ2 364 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 FAM105AQ9NUU6 356 aa11.71□□□□□ -0.53
CCDC9-203ENST00000596938 PIN4Q9Y237 131 aaKnown RBP11.71□□□□□ -0.53
CCDC9-203ENST00000596938 LZTS1Q9Y250 596 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms