RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 IFT122Q9HBG6 1241 aa19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 SRPRBQ9Y5M8 271 aaKnown RBP19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 EVPLQ92817 2033 aa19.18■□□□□ 0.66
SHKBP1-212ENST00000596163 E9PMD0 336 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 F13A1P00488 732 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 FAM189BP81408 668 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 TAP1Q03518 808 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 GRIN2CQ14957 1233 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 PPP2R5AQ15172 486 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 STK38Q15208 465 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 ATL3Q6DD88 541 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 MAEAQ7L5Y9 396 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 SP7Q8TDD2 431 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 KIFAP3Q92845 792 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 USP28Q96RU2 1077 aa19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 CDX2Q99626 313 aaPredicted RBP19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 ELAC1Q9H777 363 aaKnown RBP19.17■□□□□ 0.66
SHKBP1-212ENST00000596163 LAMA3Q16787 3333 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 C9IYK1 514 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 MGEA5O60502 916 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 CSDE1O75534 798 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 SKIP12755 728 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 FGFR4P22455 802 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 GLRA2P23416 452 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 MARCKSP29966 332 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 TXLNAP40222 546 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 NASPP49321 788 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 PTENP60484 403 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 FOXD4L5Q5VV16 416 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 IFNLR1Q8IU57 520 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 FOXD4L4Q8WXT5 416 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 IFT74Q96LB3 600 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 SAMD11Q96NU1 681 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 TGS1Q96RS0 853 aaKnown RBP19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 GAS2L1Q99501 681 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 TIPINQ9BVW5 301 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 NFKBIZQ9BYH8 718 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 TMEM161AQ9NX61 479 aa19.16■□□□□ 0.66
SHKBP1-212ENST00000596163 LCHNA4D1U4 455 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 LINC01553A4QN01 128 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 HOXA2O43364 376 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 DGKIO75912 1065 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 ERLIN2O94905 339 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 GRB10Q13322 594 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 CAPSQ13938 189 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 ZBTB8OSQ8IWT0 167 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 FIBCD1Q8N539 461 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 KRI1Q8N9T8 703 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 ASAP3Q8TDY4 903 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 GUCD1Q96NT3 240 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 PNMA5Q96PV4 448 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 C2orf40Q9H1Z8 148 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 GPRC5CQ9NQ84 441 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 CCDC39Q9UFE4 941 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 KCNG1Q9UIX4 513 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 FBXO2Q9UK22 296 aaPredicted RBP19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 CFAP45Q9UL16 551 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 PIN4Q9Y237 131 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 STXBP5LQ9Y2K9 1186 aa19.15■□□□□ 0.66
SHKBP1-212ENST00000596163 LRRIQ4A6NIV6 560 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 RBAK-RBAKDNI3L0D1 243 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 INO80B-WBP1J3KQ70 363 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 EOMESO95936 686 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 SSBP05455 408 aaKnown RBP eCLIP19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 IBSPP21815 317 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 AXLP30530 894 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 ERVK-21P61565 698 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 BTG3Q14201 252 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 TMEM119Q4V9L6 283 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 TWF2Q6IBS0 349 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 CRIPAKQ8N1N5 446 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 SYT2Q8N9I0 419 aaPredicted RBP19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 PLIN2Q99541 437 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 TRAIPQ9BWF2 469 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 CCSER1Q9C0I3 900 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 CSRNP2Q9H175 543 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 KCND2Q9NZV8 630 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 RWDD3Q9Y3V2 267 aa19.14■□□□□ 0.65
SHKBP1-212ENST00000596163 A0A0U1RQF3 1178 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 SPTLC2O15270 562 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 YEATS4O95619 227 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 PLA2G4BP0C869 781 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 NAMPTP43490 491 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 RAB27AP51159 221 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 RINT1Q6NUQ1 792 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 CMTR2Q8IYT2 770 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 LINC00301Q8NCQ3 95 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 DEPTORQ8TB45 409 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 ARNTL2Q8WYA1 636 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 ZNF689Q96CS4 500 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 DRC1Q96MC2 740 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 PRDM12Q9H4Q4 367 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 AGPAT5Q9NUQ2 364 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 TFIP11Q9UBB9 837 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 ADGRA3Q8IWK6 1321 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 SIP14410 1827 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 MICAL3Q7RTP6 2002 aa19.13■□□□□ 0.65
SHKBP1-212ENST00000596163 PPP6R2O75170 966 aa19.12■□□□□ 0.65
SHKBP1-212ENST00000596163 FOSL2P15408 326 aa19.12■□□□□ 0.65
SHKBP1-212ENST00000596163 GUCY2CP25092 1073 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms