RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 NIFKQ9BYG3 293 aaKnown RBP19.73■□□□□ 0.75
SHKBP1-203ENST00000594298 UNC45AQ9H3U1 944 aa19.73■□□□□ 0.75
SHKBP1-203ENST00000594298 ENTPD7Q9NQZ7 604 aa19.73■□□□□ 0.75
SHKBP1-203ENST00000594298 SH2B1Q9NRF2 756 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-203ENST00000594298 SPG21Q9NZD8 308 aa19.73■□□□□ 0.75
SHKBP1-203ENST00000594298 ORC3Q9UBD5 711 aaPredicted RBP19.73■□□□□ 0.75
SHKBP1-203ENST00000594298 PCDHA4Q9UN74 947 aa19.73■□□□□ 0.75
SHKBP1-203ENST00000594298 HIDE1A8MVS5 230 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 PSMD10O75832 226 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 HOXB8P17481 243 aaPredicted RBP19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 TECP42680 631 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 CDC42EP1Q00587 391 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 TBC1D8BQ0IIM8 1120 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 Q4G0T1 1027 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 CLLU1OSQ5K130 101 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 SYCE2Q6PIF2 218 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 RSPH1Q8WYR4 309 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 CEP89Q96ST8 783 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 DACT1Q9NYF0 836 aa19.72■□□□□ 0.75
SHKBP1-203ENST00000594298 CYP3A7-CYP3A51PA0A087WV96 503 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 CHMP2AO43633 222 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 LARGE1O95461 756 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 CTDNEP1O95476 244 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 CYP3A7P24462 503 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 PBX3P40426 434 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 SIGLEC14Q08ET2 396 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 B3GNT9Q6UX72 402 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 BLIDQ8IZY5 108 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 SLC39A11Q8N1S5 342 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 TBCKQ8TEA7 893 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 NLRP7Q8WX94 980 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 PBXIP1Q96AQ6 731 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 TBC1D32Q96NH3 1257 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 SCLT1Q96NL6 688 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 TRAIPQ9BWF2 469 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 MRPL9Q9BYD2 267 aaKnown RBP19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 BACH2Q9BYV9 841 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 CHST12Q9NRB3 414 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 EVPLQ92817 2033 aa19.71■□□□□ 0.75
SHKBP1-203ENST00000594298 IGKV6-21A0A0C4DH24 114 aa19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 STBD1O95210 358 aa19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 XKR3Q5GH77 459 aa19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 TMC7Q7Z402 723 aa19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 MRPL43Q8N983 215 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 DAGLBQ8NCG7 672 aa19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 CASP10Q92851 521 aa19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 ZNF668Q96K58 619 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 PRRX2Q99811 253 aa19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 LLPHQ9BRT6 129 aaKnown RBP19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 GCOM2Q9BZD3 368 aaPredicted RBP19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 TECTAO75443 2155 aa19.7■□□□□ 0.74
SHKBP1-203ENST00000594298 M0R2N6 131 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 FGFR4P22455 802 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 MCM2P49736 904 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 DRP2Q13474 957 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 SMC1AQ14683 1233 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 MOXD1Q6UVY6 613 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 MIER3Q7Z3K6 550 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 SUGP1Q8IWZ8 645 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 RNF169Q8NCN4 708 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 NSUN7Q8NE18 718 aaKnown RBP19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 GJA10Q969M2 543 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 MBOAT7Q96N66 472 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 PIEZO1Q92508 2521 aa19.69■□□□□ 0.74
SHKBP1-203ENST00000594298 MYH9P35579 1960 aaKnown RBP19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 ZNF318Q5VUA4 2279 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 C2orf71A6NGG8 1288 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 DNM2P50570 870 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 TRIM29Q14134 588 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 PTPN21Q16825 1174 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 LLGL2Q6P1M3 1020 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 CCDC83Q8IWF9 413 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 FBXL6Q8N531 539 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 PRSS33Q8NF86 280 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 ETNPPLQ8TBG4 499 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 HELQQ8TDG4 1101 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 ASIC4Q96FT7 647 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 AIFM3Q96NN9 605 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 BRMS1Q9HCU9 246 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 SEPT9Q9UHD8 586 aaPredicted RBP19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 HCFC2Q9Y5Z7 792 aa19.68■□□□□ 0.74
SHKBP1-203ENST00000594298 CARNS1A5YM72 827 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 TDP2O95551 362 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 SKIP12755 728 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 SFPQP23246 707 aaKnown RBP eCLIP19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 PHKA2P46019 1235 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 ALDH7A1P49419 539 aaKnown RBP19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 BCAR1P56945 870 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 MTERF2Q49AM1 385 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 TPRNQ4KMQ1 711 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 IER5LQ5T953 404 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 KRT25Q7Z3Z0 450 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 ZNF410Q86VK4 478 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 PHF20Q9BVI0 1012 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 INO80BQ9C086 356 aaPredicted RBP19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 KCNJ14Q9UNX9 436 aa19.67■□□□□ 0.74
SHKBP1-203ENST00000594298 A0A087WZ62 844 aa19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 CSDE1O75534 798 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 FDPSP14324 419 aaKnown RBP19.66■□□□□ 0.74
SHKBP1-203ENST00000594298 PTPN5P54829 565 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms