RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 LRRC15Q8TF66 581 aa21.67■■□□□ 1.06
CIRBP-220ENST00000588917 RUSC1Q9BVN2 902 aa21.67■■□□□ 1.06
CIRBP-220ENST00000588917 POLR3FQ9H1D9 316 aaPredicted RBP21.67■■□□□ 1.06
CIRBP-220ENST00000588917 LARSQ9P2J5 1176 aaKnown RBP21.67■■□□□ 1.06
CIRBP-220ENST00000588917 GINS2Q9Y248 185 aa21.67■■□□□ 1.06
CIRBP-220ENST00000588917 LOXHD1Q8IVV2 1947 aa21.67■■□□□ 1.06
CIRBP-220ENST00000588917 HIP1RO75146 1068 aa21.66■■□□□ 1.06
CIRBP-220ENST00000588917 MYL1P05976 194 aa21.66■■□□□ 1.06
CIRBP-220ENST00000588917 SRGAP2CP0DJJ0 459 aa21.66■■□□□ 1.06
CIRBP-220ENST00000588917 EIF4BP23588 611 aaKnown RBP21.66■■□□□ 1.06
CIRBP-220ENST00000588917 FAM160A1Q05DH4 1040 aa21.66■■□□□ 1.06
CIRBP-220ENST00000588917 FAM109BQ6ICB4 259 aaPredicted RBP21.66■■□□□ 1.06
CIRBP-220ENST00000588917 CNNM3Q8NE01 707 aa21.66■■□□□ 1.06
CIRBP-220ENST00000588917 SCLYQ96I15 445 aa21.66■■□□□ 1.06
CIRBP-220ENST00000588917 ADAMTS10Q9H324 1103 aa21.66■■□□□ 1.06
CIRBP-220ENST00000588917 SERTAD1Q9UHV2 236 aa21.66■■□□□ 1.06
CIRBP-220ENST00000588917 GPR182O15218 404 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 CSF2RAP15509 400 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 SCP2P22307 547 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 GLRA2P23416 452 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 NAMPTP43490 491 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 PHKA2P46019 1235 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 SMTNP53814 917 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 GIT2Q14161 759 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 PCBP1Q15365 356 aaKnown RBP eCLIP21.65■■□□□ 1.06
CIRBP-220ENST00000588917 LONRF3Q496Y0 759 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 FBXO47Q5MNV8 452 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 SRGAP1Q7Z6B7 1085 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 RNF149Q8NC42 400 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 DDX12PQ92771 950 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 NLRP4Q96MN2 994 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 NTPCRQ9BSD7 190 aaKnown RBP21.65■■□□□ 1.06
CIRBP-220ENST00000588917 NFKBIZQ9BYH8 718 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 C2orf40Q9H1Z8 148 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 IL23AQ9NPF7 189 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 GPRC5CQ9NQ84 441 aa21.65■■□□□ 1.06
CIRBP-220ENST00000588917 TRIP12Q14669 1992 aaPredicted RBP21.65■■□□□ 1.06
CIRBP-220ENST00000588917 PHLPP2Q6ZVD8 1323 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 A0A087WZ62 844 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 MYMKA6NI61 221 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 TBCAO75347 108 aaKnown RBP21.64■■□□□ 1.05
CIRBP-220ENST00000588917 RPS6KA5O75582 802 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 CXCL10P02778 98 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 RAD51AP2Q09MP3 1159 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 CNNM4Q6P4Q7 775 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 TSHZ1Q6ZSZ6 1077 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 KSR1Q8IVT5 923 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 FMR1NBQ8N0W7 255 aaPredicted RBP21.64■■□□□ 1.05
CIRBP-220ENST00000588917 APBB2Q92870 758 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 TIGD1Q96MW7 591 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 OSMRQ99650 979 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 C7orf25Q9BPX7 421 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 REEP2Q9BRK0 252 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 FDXACB1Q9BRP7 624 aaPredicted RBP21.64■■□□□ 1.05
CIRBP-220ENST00000588917 GOLPH3LQ9H4A5 285 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 CDHR5Q9HBB8 845 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 PARVGQ9HBI0 331 aa21.64■■□□□ 1.05
CIRBP-220ENST00000588917 HOOK1Q9UJC3 728 aaKnown RBP21.64■■□□□ 1.05
CIRBP-220ENST00000588917 LAMA2P24043 3122 aaKnown RBP21.63■■□□□ 1.05
CIRBP-220ENST00000588917 H0YCG3 227 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 ACTN4O43707 911 aaKnown RBP21.63■■□□□ 1.05
CIRBP-220ENST00000588917 GADD45BO75293 160 aaPredicted RBP21.63■■□□□ 1.05
CIRBP-220ENST00000588917 FAM13AO94988 1023 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 ACTN1P12814 892 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 PLS3P13797 630 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 DARSP14868 501 aaKnown RBP21.63■■□□□ 1.05
CIRBP-220ENST00000588917 ABCD1P33897 745 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 EFNA5P52803 228 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 PTENP60484 403 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 NCBP1Q09161 790 aaKnown RBP21.63■■□□□ 1.05
CIRBP-220ENST00000588917 DMP1Q13316 513 aaPredicted RBP21.63■■□□□ 1.05
CIRBP-220ENST00000588917 KRBA2Q6ZNG9 492 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 DYMQ7RTS9 669 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 IFNLR1Q8IU57 520 aaPredicted RBP21.63■■□□□ 1.05
CIRBP-220ENST00000588917 ZBTB8OSQ8IWT0 167 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 ENGASEQ8NFI3 743 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 ASAP3Q8TDY4 903 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 SPIRE2Q8WWL2 714 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 SEPT8Q92599 483 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 IFT122Q9HBG6 1241 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 SEL1LQ9UBV2 794 aa21.63■■□□□ 1.05
CIRBP-220ENST00000588917 NPHP3-ACAD11A0A0J9YXS1 232 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 LRRIQ4A6NIV6 560 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 NBNO60934 754 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 GAP43P17677 238 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 SFPQP23246 707 aaKnown RBP eCLIP21.62■■□□□ 1.05
CIRBP-220ENST00000588917 ZNF131P52739 623 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 PAK2Q13177 524 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 SNW1Q13573 536 aaKnown RBP21.62■■□□□ 1.05
CIRBP-220ENST00000588917 CAPSQ13938 189 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 LPIN1Q14693 890 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 PLEKHG4Q58EX7 1191 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 DEFB128Q7Z7B8 93 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 CCDC65Q8IXS2 484 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 DAW1Q8N136 415 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 MYCT1Q8N699 235 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 DEPTORQ8TB45 409 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 PAGE5Q96GU1 130 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 PPP1R16BQ96T49 567 aa21.62■■□□□ 1.05
CIRBP-220ENST00000588917 TRIM9Q9C026 710 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms