RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 CFAP47Q6ZTR5 3102 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 NFASCO94856 1347 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 CEP250Q9BV73 2442 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 IGKV6D-21A0A0A0MT36 114 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 N4BP1O75113 896 aaKnown RBP11.56□□□□□ -0.56
GGA3-219ENST00000584550 ATG7O95352 703 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 C22orf31O95567 290 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 HMGB1P09429 215 aaKnown RBP11.56□□□□□ -0.56
GGA3-219ENST00000584550 CTSAP10619 480 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 ATP4AP20648 1035 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 KLRC2P26717 231 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 GBP2P32456 591 aaPredicted RBP11.56□□□□□ -0.56
GGA3-219ENST00000584550 KIF5BP33176 963 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 SLC26A2P50443 739 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 CLCN3P51790 818 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 NLRP11P59045 1033 aaKnown RBP11.56□□□□□ -0.56
GGA3-219ENST00000584550 EXOSC10Q01780 885 aaKnown RBP11.56□□□□□ -0.56
GGA3-219ENST00000584550 FAM160B1Q5W0V3 765 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 ZC3H14Q6PJT7 736 aaKnown RBP11.56□□□□□ -0.56
GGA3-219ENST00000584550 BLOC1S2Q6QNY1 142 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 ABHD15Q6UXT9 468 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 SYNE3Q6ZMZ3 975 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 CCDC60Q8IWA6 550 aaPredicted RBP11.56□□□□□ -0.56
GGA3-219ENST00000584550 BCL7CQ8WUZ0 217 aaPredicted RBP11.56□□□□□ -0.56
GGA3-219ENST00000584550 KCNB2Q92953 911 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 MTA3Q9BTC8 594 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 IGSF9Q9P2J2 1179 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 AKT3Q9Y243 479 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 SIT1Q9Y3P8 196 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 GTF3C3Q9Y5Q9 886 aa11.56□□□□□ -0.56
GGA3-219ENST00000584550 POTEMA6NI47 508 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 CSDE1O75534 798 aaKnown RBP11.55□□□□□ -0.56
GGA3-219ENST00000584550 DDAH1O94760 285 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 PSMA5P28066 241 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 LIFRP42702 1097 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 ATXN1P54253 815 aaKnown RBP11.55□□□□□ -0.56
GGA3-219ENST00000584550 TBC1D8BQ0IIM8 1120 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 POTEGQ6S5H5 508 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 FAM43BQ6ZT52 329 aaPredicted RBP11.55□□□□□ -0.56
GGA3-219ENST00000584550 Q6ZUG5 572 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 HEATR3Q7Z4Q2 680 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 DDX53Q86TM3 631 aaKnown RBP11.55□□□□□ -0.56
GGA3-219ENST00000584550 MICU3Q86XE3 530 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 C1orf210Q8IVY1 113 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 SLC44A3Q8N4M1 653 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 LRRC71Q8N4P6 559 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 GPR152Q8TDT2 470 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 LPPQ93052 612 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 GBP3Q9H0R5 595 aa11.55□□□□□ -0.56
GGA3-219ENST00000584550 COL1A2P08123 1366 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 TPRP12270 2363 aaKnown RBP11.54□□□□□ -0.56
GGA3-219ENST00000584550 A0A0U1RQF3 1178 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 KLF18A0A0U1RQI7 1052 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 EPB41L2O43491 1005 aaKnown RBP11.54□□□□□ -0.56
GGA3-219ENST00000584550 LRRN2O75325 713 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 SEC24BO95487 1268 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 RPS6KB1P23443 525 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 EIF4BP23588 611 aaKnown RBP11.54□□□□□ -0.56
GGA3-219ENST00000584550 CLCN4P51793 760 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 GIT2Q14161 759 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 ST3GAL2Q16842 350 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 CEP55Q53EZ4 464 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 EFCAB12Q6NXP0 572 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 ZNF598Q86UK7 904 aaKnown RBP11.54□□□□□ -0.56
GGA3-219ENST00000584550 PPFIBP1Q86W92 1011 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 SUMF1Q8NBK3 374 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 IGSF21Q96ID5 467 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 SCLT1Q96NL6 688 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 KLHL5Q96PQ7 755 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 VN1R3Q9BXE9 311 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 MRPL9Q9BYD2 267 aaKnown RBP11.54□□□□□ -0.56
GGA3-219ENST00000584550 FOXQ1Q9C009 403 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 ADAMTS10Q9H324 1103 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 NCDNQ9UBB6 729 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 DNAJB4Q9UDY4 337 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 BRPF3Q9ULD4 1205 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 INPP5FQ9Y2H2 1132 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 IRAK3Q9Y616 596 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 OTOGLQ3ZCN5 2332 aa11.54□□□□□ -0.56
GGA3-219ENST00000584550 CCDC195A0A1B0GUA6 201 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 DCDC2BA2VCK2 349 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 C2CD2LO14523 706 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 KINO60870 393 aaKnown RBP11.53□□□□□ -0.56
GGA3-219ENST00000584550 GALTP07902 379 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 CNPP09543 421 aaKnown RBP11.53□□□□□ -0.56
GGA3-219ENST00000584550 CALM1P0DP23 149 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 CALM2P0DP24 149 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 CALM3P0DP25 149 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 GLULP15104 373 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 ZNF76P36508 570 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 POLGP54098 1239 aaPredicted RBP11.53□□□□□ -0.56
GGA3-219ENST00000584550 RNASELQ05823 741 aaKnown RBP11.53□□□□□ -0.56
GGA3-219ENST00000584550 PTPN14Q15678 1187 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
GGA3-219ENST00000584550 MIS18BP1Q6P0N0 1132 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 BBXQ8WY36 941 aaPredicted RBP11.53□□□□□ -0.56
GGA3-219ENST00000584550 BRF1Q92994 677 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 MYADMQ96S97 322 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 LZTS2Q9BRK4 669 aa11.53□□□□□ -0.56
GGA3-219ENST00000584550 EMILIN2Q9BXX0 1053 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms