RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SPOUT1Q5T280 376 aaKnown RBP22.77■■□□□ 1.24
SS18-224ENST00000584083 RNF169Q8NCN4 708 aa22.77■■□□□ 1.24
SS18-224ENST00000584083 TUFT1Q9NNX1 390 aa22.77■■□□□ 1.24
SS18-224ENST00000584083 DACT1Q9NYF0 836 aa22.77■■□□□ 1.24
SS18-224ENST00000584083 ASAP2O43150 1006 aa22.76■■□□□ 1.23
SS18-224ENST00000584083 FGFR1P11362 822 aa22.76■■□□□ 1.23
SS18-224ENST00000584083 TOB1P50616 345 aaPredicted RBP22.76■■□□□ 1.23
SS18-224ENST00000584083 MRPS5P82675 430 aaKnown RBP22.76■■□□□ 1.23
SS18-224ENST00000584083 CATSPER4Q7RTX7 472 aa22.76■■□□□ 1.23
SS18-224ENST00000584083 CATSPER3Q86XQ3 398 aa22.76■■□□□ 1.23
SS18-224ENST00000584083 ECHDC2Q86YB7 292 aa22.76■■□□□ 1.23
SS18-224ENST00000584083 PLVAPQ9BX97 442 aa22.76■■□□□ 1.23
SS18-224ENST00000584083 CHST12Q9NRB3 414 aa22.76■■□□□ 1.23
SS18-224ENST00000584083 PCDHB6Q9Y5E3 794 aa22.76■■□□□ 1.23
SS18-224ENST00000584083 MED24O75448 989 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 DGAT1O75907 488 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 SPATA31C1P0DKV0 1188 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 XRCC6P12956 609 aaKnown RBP eCLIP22.75■■□□□ 1.23
SS18-224ENST00000584083 RARRES1P49788 294 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 PTGDRQ13258 359 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 TJAP1Q5JTD0 557 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 FERMT3Q86UX7 667 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 ABI1Q8IZP0 508 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 C4orf32Q8N8J7 132 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 ASB2Q96Q27 587 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 POLR3CQ9BUI4 534 aaPredicted RBP22.75■■□□□ 1.23
SS18-224ENST00000584083 COL25A1Q9BXS0 654 aaPredicted RBP22.75■■□□□ 1.23
SS18-224ENST00000584083 IFT122Q9HBG6 1241 aa22.75■■□□□ 1.23
SS18-224ENST00000584083 PIN4Q9Y237 131 aaKnown RBP22.75■■□□□ 1.23
SS18-224ENST00000584083 MYO7AQ13402 2215 aa22.74■■□□□ 1.23
SS18-224ENST00000584083 GRM6O15303 877 aa22.74■■□□□ 1.23
SS18-224ENST00000584083 HOXA2O43364 376 aa22.74■■□□□ 1.23
SS18-224ENST00000584083 TWF2Q6IBS0 349 aaKnown RBP22.74■■□□□ 1.23
SS18-224ENST00000584083 SRGAP1Q7Z6B7 1085 aa22.74■■□□□ 1.23
SS18-224ENST00000584083 RNF149Q8NC42 400 aa22.74■■□□□ 1.23
SS18-224ENST00000584083 HLA-CQ95604 372 aa22.74■■□□□ 1.23
SS18-224ENST00000584083 NACC1Q96RE7 527 aa22.74■■□□□ 1.23
SS18-224ENST00000584083 XPNPEP1Q9NQW7 623 aa22.74■■□□□ 1.23
SS18-224ENST00000584083 COG5Q9UP83 839 aa22.74■■□□□ 1.23
SS18-224ENST00000584083 A0A0U1RQF3 1178 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 RPA1P27694 616 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 PHKA2P46019 1235 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 FXR2P51116 673 aaKnown RBP eCLIP22.73■■□□□ 1.23
SS18-224ENST00000584083 TFF2Q03403 129 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 MXD4Q14582 209 aaPredicted RBP22.73■■□□□ 1.23
SS18-224ENST00000584083 AAK1Q2M2I8 961 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 TIGD5Q53EQ6 642 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 LARP1BQ659C4 914 aaKnown RBP22.73■■□□□ 1.23
SS18-224ENST00000584083 POTEGQ6S5H5 508 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 SYMPKQ92797 1274 aaKnown RBP22.73■■□□□ 1.23
SS18-224ENST00000584083 P2RX5Q93086 422 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 TMEM117Q9H0C3 514 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 LMAN2LQ9H0V9 348 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 ALG13Q9NP73 1137 aaKnown RBP22.73■■□□□ 1.23
SS18-224ENST00000584083 AAASQ9NRG9 546 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 LRWD1Q9UFC0 647 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 PLAGL2Q9UPG8 496 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 GTF3C3Q9Y5Q9 886 aa22.73■■□□□ 1.23
SS18-224ENST00000584083 USO1O60763 962 aaKnown RBP22.72■■□□□ 1.23
SS18-224ENST00000584083 CSPG5O95196 566 aa22.72■■□□□ 1.23
SS18-224ENST00000584083 EOMESO95936 686 aa22.72■■□□□ 1.23
SS18-224ENST00000584083 CCT6AP40227 531 aaKnown RBP22.72■■□□□ 1.23
SS18-224ENST00000584083 TFDP1Q14186 410 aa22.72■■□□□ 1.23
SS18-224ENST00000584083 NAALADL2Q58DX5 795 aa22.72■■□□□ 1.23
SS18-224ENST00000584083 RILPL1Q5EBL4 403 aa22.72■■□□□ 1.23
SS18-224ENST00000584083 HAUS3Q68CZ6 603 aa22.72■■□□□ 1.23
SS18-224ENST00000584083 KLHL23Q8NBE8 558 aa22.72■■□□□ 1.23
SS18-224ENST00000584083 RAB34Q9BZG1 259 aa22.72■■□□□ 1.23
SS18-224ENST00000584083 TYW1Q9NV66 732 aaKnown RBP22.72■■□□□ 1.23
SS18-224ENST00000584083 PCDHB12Q9Y5F1 795 aa22.72■■□□□ 1.23
SS18-224ENST00000584083 ATG2AQ2TAZ0 1938 aa22.71■■□□□ 1.23
SS18-224ENST00000584083 TCF20Q9UGU0 1960 aaKnown RBP22.71■■□□□ 1.23
SS18-224ENST00000584083 LAD1O00515 517 aa22.71■■□□□ 1.23
SS18-224ENST00000584083 SKIP12755 728 aa22.71■■□□□ 1.23
SS18-224ENST00000584083 MAEAQ7L5Y9 396 aa22.71■■□□□ 1.23
SS18-224ENST00000584083 CASD1Q96PB1 797 aa22.71■■□□□ 1.23
SS18-224ENST00000584083 NSUN3Q9H649 340 aaKnown RBP22.71■■□□□ 1.23
SS18-224ENST00000584083 MINDY3Q9H8M7 445 aa22.71■■□□□ 1.23
SS18-224ENST00000584083 AGPAT5Q9NUQ2 364 aa22.71■■□□□ 1.23
SS18-224ENST00000584083 RNF19AQ9NV58 838 aa22.71■■□□□ 1.23
SS18-224ENST00000584083 DBR1Q9UK59 544 aaKnown RBP22.71■■□□□ 1.23
SS18-224ENST00000584083 ITGB1P05556 798 aa22.7■■□□□ 1.22
SS18-224ENST00000584083 ARL2P36404 184 aa22.7■■□□□ 1.22
SS18-224ENST00000584083 PDIA5Q14554 519 aa22.7■■□□□ 1.22
SS18-224ENST00000584083 TCEAL5Q5H9L2 206 aa22.7■■□□□ 1.22
SS18-224ENST00000584083 ZNF598Q86UK7 904 aaKnown RBP22.7■■□□□ 1.22
SS18-224ENST00000584083 ASAP3Q8TDY4 903 aa22.7■■□□□ 1.22
SS18-224ENST00000584083 POLR3FQ9H1D9 316 aaPredicted RBP22.7■■□□□ 1.22
SS18-224ENST00000584083 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.7■■□□□ 1.22
SS18-224ENST00000584083 HCSTQ9UBK5 93 aa22.7■■□□□ 1.22
SS18-224ENST00000584083 PLXNA4Q9HCM2 1894 aa22.7■■□□□ 1.22
SS18-224ENST00000584083 BRWD1Q9NSI6 2320 aa22.7■■□□□ 1.22
SS18-224ENST00000584083 ARHGEF35A5YM69 484 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 ERLIN2O94905 339 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 ATF7P17544 494 aaPredicted RBP22.69■■□□□ 1.22
SS18-224ENST00000584083 PTENP60484 403 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 CUL4AQ13619 759 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 LONRF3Q496Y0 759 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 CLLU1OSQ5K130 101 aa22.69■■□□□ 1.22
SS18-224ENST00000584083 DTHD1Q6ZMT9 781 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms