RNA–Protein interactions for RNA: ENST00000581273.5

TVP23C-208, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 3

Gene TVP23C, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-208ENST00000581273 HIP1RO75146 1068 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SSBP05455 408 aaKnown RBP eCLIP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SLURP2P0DP57 97 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SLC5A1P13866 664 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 ATP2A2P16615 1042 aaKnown RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SKIV2L2P42285 1042 aaKnown RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 RAB27AP51159 221 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 STX17P56962 302 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 CUL3Q13618 768 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 PUM3Q15397 648 aaKnown RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SHHQ15465 462 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 LRRC23Q53EV4 343 aaPredicted RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SH2D4BQ5SQS7 431 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 C9orf50Q5SZB4 431 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 C10orf76Q5T2E6 689 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 KCTD16Q68DU8 428 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 APOA5Q6Q788 366 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 FASTKD5Q7L8L6 764 aaKnown RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 FAM228AQ86W67 206 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 GSPT2Q8IYD1 628 aaKnown RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 GALNT15Q8N3T1 639 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 WDR66Q8TBY9 1149 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 RRP36Q96EU6 259 aaKnown RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 FBXL18Q96ME1 805 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 PCMTD1Q96MG8 357 aaPredicted RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 TRAPPC9Q96Q05 1148 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 DBNDD2Q9BQY9 259 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 MRIQ9BWK5 157 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 FAM129AQ9BZQ8 928 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 RAB17Q9H0T7 212 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 CUEDC2Q9H467 287 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 RABEP2Q9H5N1 569 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 C11orf49Q9H6J7 331 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SENP2Q9HC62 589 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SLC39A2Q9NP94 309 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 PAPOLBQ9NRJ5 636 aaKnown RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 FAM114A2Q9NRY5 505 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 FAM198AQ9UFP1 575 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SLC12A6Q9UHW9 1150 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 DMGDHQ9UI17 866 aaKnown RBP8.12□□□□□ -1.11
TVP23C-208ENST00000581273 ZNF112Q9UJU3 913 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SUGT1Q9Y2Z0 365 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 SH3BP1Q9Y3L3 701 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 PCDHA13Q9Y5I0 950 aa8.12□□□□□ -1.11
TVP23C-208ENST00000581273 ATP8B3O60423 1300 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 PHIPQ8WWQ0 1821 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 MACROD2A1Z1Q3 448 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 A6NHS1 94 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 CCDC169A6NNP5 214 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 ENO4A6NNW6 628 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 DNM1LO00429 736 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 AKR1B10O60218 316 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 SMIM24O75264 130 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 KRT14P02533 472 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 LDHBP07195 334 aaKnown RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 BMP1P13497 986 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 NQO1P15559 274 aaKnown RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 DRD4P21917 467 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 PRDX5P30044 214 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 CTNNA1P35221 906 aaKnown RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 MAGEA1P43355 309 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 MAGEA8P43361 318 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 RFX5P48382 616 aaPredicted RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 PDE6CP51160 858 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 SEC24CP53992 1094 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 MXRA7P84157 204 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 GUCY2DQ02846 1103 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 BYSLQ13895 437 aaKnown RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 COL9A3Q14050 684 aaPredicted RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 PDIA5Q14554 519 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 ALX1Q15699 326 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 NOL9Q5SY16 702 aaKnown RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 PADI6Q6TGC4 694 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 MTHFD1LQ6UB35 978 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 SH2D3CQ8N5H7 860 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 ANKRD13CQ8N6S4 541 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 VGLL2Q8N8G2 317 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 ZNF507Q8TCN5 953 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 COA7Q96BR5 231 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 XPO6Q96QU8 1125 aaKnown RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 MED15Q96RN5 788 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 ERGIC2Q96RQ1 377 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 CHP1Q99653 195 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 TMUB1Q9BVT8 246 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 SLC26A6Q9BXS9 759 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 TRIM4Q9C037 500 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 FAM192AQ9GZU8 254 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 CSRNP2Q9H175 543 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 VCX3BQ9H321 246 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 NDST4Q9H3R1 872 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 CCDC134Q9H6E4 229 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 EPB41L5Q9HCM4 733 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 VCX3AQ9NNX9 186 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 PAK6Q9NQU5 681 aaPredicted RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 IRAK4Q9NWZ3 460 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 CTTNBP2NLQ9P2B4 639 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 LARSQ9P2J5 1176 aaKnown RBP8.11□□□□□ -1.11
TVP23C-208ENST00000581273 REV3LO60673 3130 aa8.11□□□□□ -1.11
TVP23C-208ENST00000581273 DOCK1Q14185 1865 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms