RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 NOSTRINQ8IVI9 506 aa18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 TPH2Q8IWU9 490 aa18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 PRPF31Q8WWY3 499 aaKnown RBP18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 PSPC1Q8WXF1 523 aaKnown RBP18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 RSPH1Q8WYR4 309 aa18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 TMEM60Q9H2L4 133 aa18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 UBE2ZQ9H832 354 aaPredicted RBP18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 UPF2Q9HAU5 1272 aaKnown RBP18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 IFT122Q9HBG6 1241 aa18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 AAASQ9NRG9 546 aa18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 COL4A3BPQ9Y5P4 624 aa18.95■□□□□ 0.62
CDC42EP4-206ENST00000581014 TBKBP1A7MCY6 615 aa18.94■□□□□ 0.62
CDC42EP4-206ENST00000581014 ITGB1P05556 798 aa18.94■□□□□ 0.62
CDC42EP4-206ENST00000581014 CSPP1Q1MSJ5 1256 aa18.94■□□□□ 0.62
CDC42EP4-206ENST00000581014 PAN2Q504Q3 1202 aaKnown RBP18.94■□□□□ 0.62
CDC42EP4-206ENST00000581014 TCEAL5Q5H9L2 206 aa18.94■□□□□ 0.62
CDC42EP4-206ENST00000581014 KLHL23Q8NBE8 558 aa18.94■□□□□ 0.62
CDC42EP4-206ENST00000581014 SPPL3Q8TCT6 385 aa18.94■□□□□ 0.62
CDC42EP4-206ENST00000581014 TCP11Q8WWU5 503 aa18.94■□□□□ 0.62
CDC42EP4-206ENST00000581014 RNF19AQ9NV58 838 aa18.94■□□□□ 0.62
CDC42EP4-206ENST00000581014 ZBTB39O15060 712 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 CSDE1O75534 798 aaKnown RBP18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 FGFR1P11362 822 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 FGFR4P22455 802 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 MCM7P33993 719 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 UBE3AQ05086 875 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 POU5F1BQ06416 359 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 EMC2Q15006 297 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 PCBP1Q15365 356 aaKnown RBP eCLIP18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 LEXMQ3ZCV2 418 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 XKR9Q5GH70 373 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 SRGAP1Q7Z6B7 1085 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 KSR1Q8IVT5 923 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 TMEM143Q96AN5 459 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 PABPC5Q96DU9 382 aaKnown RBP18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 NLRP4Q96MN2 994 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 CASD1Q96PB1 797 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 ALG13Q9NP73 1137 aaKnown RBP18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 XPNPEP1Q9NQW7 623 aa18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 TYW1Q9NV66 732 aaKnown RBP18.93■□□□□ 0.62
CDC42EP4-206ENST00000581014 ZNF623O75123 536 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 DGAT1O75907 488 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 SPATA31C1P0DKV0 1188 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 SKIP12755 728 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 MCM2P49736 904 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 LAMTOR4Q0VGL1 99 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 CTC1Q2NKJ3 1217 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 FERMT3Q86UX7 667 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 TBC1D32Q96NH3 1257 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 POLR3CQ9BUI4 534 aaPredicted RBP18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 CWH43Q9H720 699 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 TUFT1Q9NNX1 390 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 KIF3AQ9Y496 699 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 PCDHB12Q9Y5F1 795 aa18.92■□□□□ 0.62
CDC42EP4-206ENST00000581014 OR52Z1P0C646 297 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 ATF7P17544 494 aaPredicted RBP18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 LAG3P18627 525 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 ATP2B1P20020 1258 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 DNAJB1P25685 340 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 PHKA2P46019 1235 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 RARRES1P49788 294 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 MXD4Q14582 209 aaPredicted RBP18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 TTC38Q5R3I4 469 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 IFNLR1Q8IU57 520 aaPredicted RBP18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 C4orf32Q8N8J7 132 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 TMX3Q96JJ7 454 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 MTRQ99707 1265 aa18.91■□□□□ 0.62
CDC42EP4-206ENST00000581014 FNDC1Q4ZHG4 1894 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 POTEMA6NI47 508 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 IBSPP21815 317 aaPredicted RBP18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 MUTP22033 750 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 ARL2P36404 184 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 RAB27AP51159 221 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 GNL2Q13823 731 aaKnown RBP18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 ZNF174Q15697 407 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 PUS10Q3MIT2 529 aaKnown RBP18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 CLLU1OSQ5K130 101 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 LRRC55Q6ZSA7 311 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 CATSPER4Q7RTX7 472 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 CATSPER3Q86XQ3 398 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 ABI1Q8IZP0 508 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 LRRC43Q8N309 656 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 AGPAT5Q9NUQ2 364 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 NOL7Q9UMY1 257 aaKnown RBP18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 LZTS1Q9Y250 596 aa18.9■□□□□ 0.62
CDC42EP4-206ENST00000581014 PLXNA4Q9HCM2 1894 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 SRGAP2CP0DJJ0 459 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 KCNA5P22460 613 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 RPA1P27694 616 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 TOB1P50616 345 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 FXR2P51116 673 aaKnown RBP eCLIP18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 PTENP60484 403 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 PLCB3Q01970 1234 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 HYAL1Q12794 435 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 TWF2Q6IBS0 349 aaKnown RBP18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 COLGALT1Q8NBJ5 622 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 POF1BQ8WVV4 589 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 PPP2R3CQ969Q6 453 aa18.89■□□□□ 0.61
CDC42EP4-206ENST00000581014 NACC1Q96RE7 527 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms