RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 KLHL40Q2TBA0 621 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 SKOR2Q2VWA4 1001 aaPredicted RBP11.52□□□□□ -0.57
CCDC47-203ENST00000580986 TRIM60Q495X7 471 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 FAM26DQ5JW98 314 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 NT5DC1Q5TFE4 455 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 TRMT1LQ7Z2T5 733 aaKnown RBP11.52□□□□□ -0.57
CCDC47-203ENST00000580986 DAW1Q8N136 415 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 GPT2Q8TD30 523 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 SPIRE2Q8WWL2 714 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 SH2D3AQ9BRG2 576 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 REEP2Q9BRK0 252 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 GTPBP4Q9BZE4 634 aaKnown RBP11.52□□□□□ -0.57
CCDC47-203ENST00000580986 PARVGQ9HBI0 331 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 TRMT13Q9NUP7 481 aaKnown RBP11.52□□□□□ -0.57
CCDC47-203ENST00000580986 TBX21Q9UL17 535 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 NOD1Q9Y239 953 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 COL4A3BPQ9Y5P4 624 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 ALPK3Q96L96 1907 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 MYH11P35749 1972 aa11.52□□□□□ -0.57
CCDC47-203ENST00000580986 A0A087WWV3 80 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 CCDC85CA6NKD9 419 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 H0YCG3 227 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 HIP1RO75146 1068 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 TBCAO75347 108 aaKnown RBP11.51□□□□□ -0.57
CCDC47-203ENST00000580986 CLTBP09497 229 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 PLS3P13797 630 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 CLCN3P51790 818 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 CHMP4BP1P59074 171 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 ZNF200P98182 395 aaPredicted RBP11.51□□□□□ -0.57
CCDC47-203ENST00000580986 TLE2Q04725 743 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 DPYDQ12882 1025 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 KCNB1Q14721 858 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 RUFY4Q6ZNE9 571 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 UNC13DQ70J99 1090 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 CCDC65Q8IXS2 484 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 ZNF687Q8N1G0 1237 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 LRRC71Q8N4P6 559 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 METTL13Q8N6R0 699 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 USP38Q8NB14 1042 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 DHX38Q92620 1227 aaKnown RBP11.51□□□□□ -0.57
CCDC47-203ENST00000580986 RNF166Q96A37 237 aaPredicted RBP11.51□□□□□ -0.57
CCDC47-203ENST00000580986 GSDMAQ96QA5 445 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 TRPV6Q9H1D0 765 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 CLSTN2Q9H4D0 955 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 ST6GALNAC4Q9H4F1 302 aa11.51□□□□□ -0.57
CCDC47-203ENST00000580986 SUCLA2Q9P2R7 463 aaPredicted RBP11.51□□□□□ -0.57
CCDC47-203ENST00000580986 M0QZ92 97 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 KIAA0355O15063 1070 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 PQBP1O60828 265 aaKnown RBP11.5□□□□□ -0.57
CCDC47-203ENST00000580986 GPR32O75388 356 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 RHOBTB3O94955 611 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 KRT18P05783 430 aaKnown RBP11.5□□□□□ -0.57
CCDC47-203ENST00000580986 GLRA2P23416 452 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 GPC3P51654 580 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 SOX10P56693 466 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 MGAT3Q09327 533 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 LAMTOR4Q0VGL1 99 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 DMP1Q13316 513 aaPredicted RBP11.5□□□□□ -0.57
CCDC47-203ENST00000580986 DRP2Q13474 957 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 ALCAMQ13740 583 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 TFDP1Q14186 410 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 FAM102BQ5T8I3 360 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 CDCA2Q69YH5 1023 aaPredicted RBP11.5□□□□□ -0.57
CCDC47-203ENST00000580986 RBM43Q6ZSC3 357 aaKnown RBP11.5□□□□□ -0.57
CCDC47-203ENST00000580986 DNAJB3Q8WWF6 145 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 PRPF31Q8WWY3 499 aaKnown RBP11.5□□□□□ -0.57
CCDC47-203ENST00000580986 IFT74Q96LB3 600 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 POLR3FQ9H1D9 316 aaPredicted RBP11.5□□□□□ -0.57
CCDC47-203ENST00000580986 NUP62CLQ9H1M0 184 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 C2orf40Q9H1Z8 148 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 SUGCTQ9HAC7 445 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 RMND1Q9NWS8 449 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 ARHGAP28Q9P2N2 729 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 AKT3Q9Y243 479 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 SIP14410 1827 aa11.5□□□□□ -0.57
CCDC47-203ENST00000580986 FAM13AO94988 1023 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 SMC2O95347 1197 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 CKBP12277 381 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 AFMP43652 599 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 SARSP49591 514 aaKnown RBP11.49□□□□□ -0.57
CCDC47-203ENST00000580986 EFNA5P52803 228 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 CRYBB1P53674 252 aaPredicted RBP11.49□□□□□ -0.57
CCDC47-203ENST00000580986 SMTNP53814 917 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 NCKAP1LP55160 1127 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 PTENP60484 403 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 ASIC1P78348 528 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 MRPS6P82932 125 aaKnown RBP11.49□□□□□ -0.57
CCDC47-203ENST00000580986 PSMD2Q13200 908 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 CUL4BQ13620 913 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 CAPSQ13938 189 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 DHX8Q14562 1220 aaKnown RBP11.49□□□□□ -0.57
CCDC47-203ENST00000580986 NFKBIBQ15653 356 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 COBLL1Q53SF7 1204 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 SRGAP1Q7Z6B7 1085 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 TRIML1Q8N9V2 468 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 WNT8BQ93098 351 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 CCDC47Q96A33 483 aaKnown RBP11.49□□□□□ -0.57
CCDC47-203ENST00000580986 SYAP1Q96A49 352 aaPredicted RBP11.49□□□□□ -0.57
CCDC47-203ENST00000580986 TMEM143Q96AN5 459 aa11.49□□□□□ -0.57
CCDC47-203ENST00000580986 HVCN1Q96D96 273 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms