RNA–Protein interactions for RNA: ENST00000580980.1

PSMD3-205, Transcript of proteasome 26S subunit, non-ATPase 3, human

TSL 2

Gene PSMD3, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD3-205	ENST00000580980	COL4A3BP	Q9Y5P4	624 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	PRRC2B	Q5JSZ5	2229 aa	Known RBP	13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980	LOXHD1	Q8IVV2	1947 aa		13.6	□□□□□ -0.23
PSMD3-205	ENST00000580980		A0A0C4DFX4	3053 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	TBKBP1	A7MCY6	615 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	GRM6	O15303	877 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	SKI	P12755	728 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	BMP1	P13497	986 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	U2AF2	P26368	475 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	GJB2	P29033	226 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	GATM	P50440	423 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	TFF2	Q03403	129 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	EMC2	Q15006	297 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	CSPP1	Q1MSJ5	1256 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	FAM102B	Q5T8I3	360 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	SRGAP1	Q7Z6B7	1085 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	ECHDC2	Q86YB7	292 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	PRPF31	Q8WWY3	499 aa	Known RBP	13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	MTR	Q99707	1265 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	IFT122	Q9HBG6	1241 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	TUFT1	Q9NNX1	390 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	PLAGL2	Q9UPG8	496 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	PCDHB12	Q9Y5F1	795 aa		13.59	□□□□□ -0.23
PSMD3-205	ENST00000580980	ZBTB39	O15060	712 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	DGAT1	O75907	488 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	OR52Z1	P0C646	297 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	PDC	P20941	246 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	IBSP	P21815	317 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	FGFR4	P22455	802 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	DDIT3	P35638	169 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	UBE3A	Q05086	875 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	MXD4	Q14582	209 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	COL19A1	Q14993	1142 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	ZNF174	Q15697	407 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	TTC38	Q5R3I4	469 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	ZNF598	Q86UK7	904 aa	Known RBP	13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	FERMT3	Q86UX7	667 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	KSR1	Q8IVT5	923 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	ABI1	Q8IZP0	508 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	KLHL23	Q8NBE8	558 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	ADAMTS19	Q8TE59	1207 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	TMEM143	Q96AN5	459 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	NLRP4	Q96MN2	994 aa		13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	UBE2Z	Q9H832	354 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	TYW1	Q9NV66	732 aa	Known RBP	13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	DAXX	Q9UER7	740 aa	Predicted RBP	13.58	□□□□□ -0.24
PSMD3-205	ENST00000580980	NLRC5	Q86WI3	1866 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	POTEM	A6NI47	508 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	CSDE1	O75534	798 aa	Known RBP	13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	ITGB1	P05556	798 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	FGFR1	P11362	822 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	LAG3	P18627	525 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	MUT	P22033	750 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	RAB27A	P51159	221 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	POU5F1B	Q06416	359 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	LAMTOR4	Q0VGL1	99 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	LEXM	Q3ZCV2	418 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	TCEAL5	Q5H9L2	206 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	SPOUT1	Q5T280	376 aa	Known RBP	13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	CATSPER4	Q7RTX7	472 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	ERMN	Q8TAM6	284 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	SPPL3	Q8TCT6	385 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	PABPC5	Q96DU9	382 aa	Known RBP	13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	CCDC43	Q96MW1	224 aa	Known RBP	13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	CASD1	Q96PB1	797 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	CWH43	Q9H720	699 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	ALG13	Q9NP73	1137 aa	Known RBP	13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	RNF19A	Q9NV58	838 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	STK24	Q9Y6E0	443 aa		13.57	□□□□□ -0.24
PSMD3-205	ENST00000580980	TNFRSF10A	O00220	468 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	ZNF623	O75123	536 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	SRGAP2C	P0DJJ0	459 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	SPATA31C1	P0DKV0	1188 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	RPA1	P27694	616 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	TEC	P42680	631 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	PHKA2	P46019	1235 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	RARRES1	P49788	294 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	FXR2	P51116	673 aa	Known RBP eCLIP	13.56	□□□□□ -0.24	7e-7	■■□□□ 13.2
PSMD3-205	ENST00000580980	KCNQ1	P51787	676 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	TFDP1	Q14186	410 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	PUS10	Q3MIT2	529 aa	Known RBP	13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	TWF2	Q6IBS0	349 aa	Known RBP	13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	CATSPER3	Q86XQ3	398 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	LRRC43	Q8N309	656 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	C4orf32	Q8N8J7	132 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	COLGALT1	Q8NBJ5	622 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	PPP2R3C	Q969Q6	453 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	NACC1	Q96RE7	527 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	UHRF1	Q96T88	793 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	MRPL9	Q9BYD2	267 aa	Known RBP	13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	XPNPEP1	Q9NQW7	623 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	AGPAT5	Q9NUQ2	364 aa		13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	DBR1	Q9UK59	544 aa	Known RBP	13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	PIN4	Q9Y237	131 aa	Known RBP	13.56	□□□□□ -0.24
PSMD3-205	ENST00000580980	CARNS1	A5YM72	827 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	LAD1	O00515	517 aa		13.55	□□□□□ -0.24
PSMD3-205	ENST00000580980	ATF7	P17544	494 aa	Predicted RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms