RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 SERPINB2P05120 415 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 CCND2P30279 289 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 FAM167AQ96KS9 214 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 XPO6Q96QU8 1125 aaKnown RBP11.44□□□□□ -0.58
SEC22B-201ENST00000578049 CYTH2Q99418 400 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 KIF1BO60333 1816 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 CPDO75976 1380 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 WDR91A4D1P6 747 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 CDK8P49336 464 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 TRIM28Q13263 835 aaKnown RBP11.44□□□□□ -0.58
SEC22B-201ENST00000578049 RNPC3Q96LT9 517 aaKnown RBP11.44□□□□□ -0.58
SEC22B-201ENST00000578049 PCIF1Q9H4Z3 704 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 CLEC11AQ9Y240 323 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 RHOBTB3O94955 611 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 USP11P51784 963 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 COPS2P61201 443 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 DYNLT1P63172 113 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 ZNF667Q5HYK9 610 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 USP17L2Q6R6M4 530 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 SFR1Q86XK3 245 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 ZBTB1Q9Y2K1 713 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 E7ENQ6 273 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 K7ERI5 159 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 IGKV5-2P06315 115 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 LSP1P33241 339 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 TFAMQ00059 246 aaKnown RBP11.44□□□□□ -0.58
SEC22B-201ENST00000578049 AP1B1Q10567 949 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 TRIM67Q6ZTA4 783 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 TC2NQ8N9U0 490 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 TIPINQ9BVW5 301 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 NDUFA13Q9P0J0 144 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 PXDNLA1KZ92 1463 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 INO80B-WBP1J3KQ70 363 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 EDRF1Q3B7T1 1238 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 FAM161BQ96MY7 647 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 INO80BQ9C086 356 aaPredicted RBP11.44□□□□□ -0.58
SEC22B-201ENST00000578049 KRT82Q9NSB4 513 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 ABCB11O95342 1321 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 TYW5A2RUC4 315 aaKnown RBP11.44□□□□□ -0.58
SEC22B-201ENST00000578049 SOX5P35711 763 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 CRKLP46109 303 aaKnown RBP11.44□□□□□ -0.58
SEC22B-201ENST00000578049 PI16Q6UXB8 463 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 LRRC1Q9BTT6 524 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 TRPC5Q9UL62 973 aaPredicted RBP11.44□□□□□ -0.58
SEC22B-201ENST00000578049 INTUQ9ULD6 942 aa11.44□□□□□ -0.58
SEC22B-201ENST00000578049 ABCA8O94911 1581 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 ESYT3A0FGR9 886 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 UBAP1LF5GYI3 381 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 AP3B1O00203 1094 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 HDLBPQ00341 1268 aaKnown RBP11.43□□□□□ -0.58
SEC22B-201ENST00000578049 KRT76Q01546 638 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 ENAHQ8N8S7 591 aaPredicted RBP11.43□□□□□ -0.58
SEC22B-201ENST00000578049 ING2Q9H160 280 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 RANBP17Q9H2T7 1088 aaKnown RBP11.43□□□□□ -0.58
SEC22B-201ENST00000578049 DNAJC5BQ9UF47 199 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 METP08581 1390 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 DRAP1Q14919 205 aaPredicted RBP11.43□□□□□ -0.58
SEC22B-201ENST00000578049 CDKL3Q8IVW4 592 aaPredicted RBP11.43□□□□□ -0.58
SEC22B-201ENST00000578049 CEP19Q96LK0 163 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 MAGEB5Q9BZ81 275 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 PRLRP16471 622 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 ZFXP17010 805 aaPredicted RBP11.43□□□□□ -0.58
SEC22B-201ENST00000578049 PRELPP51888 382 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 GUCY1A3Q02108 690 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 CFAP36Q96G28 342 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 TRIM9Q9C026 710 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 HDAC6Q9UBN7 1215 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 ADCY10Q96PN6 1610 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 H2AFXP16104 143 aaPredicted RBP11.43□□□□□ -0.58
SEC22B-201ENST00000578049 SFNP31947 248 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 POTEAQ6S8J7 498 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 RSRC2Q7L4I2 434 aaKnown RBP11.43□□□□□ -0.58
SEC22B-201ENST00000578049 NUDCD3Q8IVD9 361 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 SIX6OS1Q8N1H7 587 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 SLAIN2Q9P270 581 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 KDM6BO15054 1643 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 KRT14P02533 472 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 CCNA1P78396 465 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 MECOMQ03112 1051 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 MED21Q13503 144 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 CUL3Q13618 768 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 HIC1Q14526 733 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 KCTD2Q14681 263 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 METTL23Q86XA0 190 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 KIAA0825Q8IV33 1275 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 KCNK16Q96T55 309 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 C7orf25Q9BPX7 421 aa11.43□□□□□ -0.58
SEC22B-201ENST00000578049 MEIS1O00470 390 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 TXNRD1Q16881 649 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 C16orf87Q6PH81 154 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 DYDC2Q96IM9 177 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 MSTO1Q9BUK6 570 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 TRPM1Q7Z4N2 1603 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 LPXNO60711 386 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 TRADDQ15628 312 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 TMEM47Q9BQJ4 181 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 NUP85Q9BW27 656 aa11.42□□□□□ -0.58
SEC22B-201ENST00000578049 FRMD8Q9BZ67 464 aaPredicted RBP11.42□□□□□ -0.58
SEC22B-201ENST00000578049 INTS2Q9H0H0 1204 aaKnown RBP11.42□□□□□ -0.58
SEC22B-201ENST00000578049 BFARQ9NZS9 450 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms