RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 KCNG4Q8TDN1 519 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 COPS5Q92905 334 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 RNF41Q9H4P4 317 aaPredicted RBP7.11□□□□□ -1.27
UBFD1-204ENST00000565634 TUT1Q9H6E5 874 aaKnown RBP7.11□□□□□ -1.27
UBFD1-204ENST00000565634 KANSL2Q9H9L4 492 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 NCOA5Q9HCD5 579 aaKnown RBP7.11□□□□□ -1.27
UBFD1-204ENST00000565634 PPP1R9AQ9ULJ8 1098 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 STX8Q9UNK0 236 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 FAM50BQ9Y247 325 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 TMX2Q9Y320 296 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 PKD1L2Q7Z442 2459 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 CHD6Q8TD26 2715 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 RALGAPA2Q2PPJ7 1873 aa7.11□□□□□ -1.27
UBFD1-204ENST00000565634 DNAH14Q0VDD8 3507 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 ELOA3CA0A087WX78 387 aaPredicted RBP7.1□□□□□ -1.27
UBFD1-204ENST00000565634 ELOA3DA6NLF2 546 aaPredicted RBP7.1□□□□□ -1.27
UBFD1-204ENST00000565634 SFI1A8K8P3 1242 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 GRM6O15303 877 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 CABYRO75952 493 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 PLEKHA8P1O95397 391 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 CTDNEP1O95476 244 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 TTLL1O95922 423 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 SUPT20HL2P0C7V6 817 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 PDIA3P30101 505 aaKnown RBP7.1□□□□□ -1.27
UBFD1-204ENST00000565634 NBL1P41271 181 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 ANAPC15P60006 121 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 RBM10P98175 930 aaKnown RBP7.1□□□□□ -1.27
UBFD1-204ENST00000565634 ICA1Q05084 483 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 SIGLEC14Q08ET2 396 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 TROAPQ12815 778 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 SFSWAPQ12872 951 aaKnown RBP7.1□□□□□ -1.27
UBFD1-204ENST00000565634 TRDNQ13061 729 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 WTAPQ15007 396 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 ME3Q16798 604 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 ST3GAL2Q16842 350 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 SWI5Q1ZZU3 235 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 ELOA3BQ3SY89 546 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 SLFN13Q68D06 897 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 TAPT1Q6NXT6 567 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 RALYLQ86SE5 291 aaKnown RBP7.1□□□□□ -1.27
UBFD1-204ENST00000565634 DGKHQ86XP1 1220 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 SLC9A9Q8IVB4 645 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 MYOCDQ8IZQ8 938 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 SRBD1Q8N5C6 995 aaKnown RBP7.1□□□□□ -1.27
UBFD1-204ENST00000565634 ELOA3Q8NG57 546 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 PIBF1Q8WXW3 757 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 APOL5Q9BWW9 433 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 AGXT2Q9BYV1 514 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 OSBPL7Q9BZF2 842 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 NSUN3Q9H649 340 aaKnown RBP7.1□□□□□ -1.27
UBFD1-204ENST00000565634 CNNM2Q9H8M5 875 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 MAD2L2Q9UI95 211 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 CD207Q9UJ71 328 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 CYP46A1Q9Y6A2 500 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 RALGAPA1Q6GYQ0 2036 aa7.1□□□□□ -1.27
UBFD1-204ENST00000565634 LOXHD1Q8IVV2 1947 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 PLIN4Q96Q06 1357 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 KLF18A0A0U1RQI7 1052 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 H3BNC9 293 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 WDR46O15213 610 aaKnown RBP7.09□□□□□ -1.27
UBFD1-204ENST00000565634 CYTH3O43739 400 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 LZTS3O60299 673 aaPredicted RBP7.09□□□□□ -1.27
UBFD1-204ENST00000565634 ZEB2O60315 1214 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 TOP1P11387 765 aaKnown RBP7.09□□□□□ -1.27
UBFD1-204ENST00000565634 PSMA5P28066 241 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 EVCP57679 992 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 PURAQ00577 322 aaKnown RBP7.09□□□□□ -1.27
UBFD1-204ENST00000565634 KRT32Q14532 448 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 PTPROQ16827 1216 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 IFIT1BQ5T764 474 aaKnown RBP7.09□□□□□ -1.27
UBFD1-204ENST00000565634 CAPN12Q6ZSI9 719 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 RBM23Q86U06 439 aaKnown RBP7.09□□□□□ -1.27
UBFD1-204ENST00000565634 TMEM192Q8IY95 271 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 MSL3Q8N5Y2 521 aaKnown RBP7.09□□□□□ -1.27
UBFD1-204ENST00000565634 FAM133AQ8N9E0 248 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 CHAMP1Q96JM3 812 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 RIPOR3Q96MK2 946 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 SLC30A3Q99726 388 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 VAT1LQ9HCJ6 419 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 SEPT3Q9UH03 358 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 NAP1L2Q9ULW6 460 aaPredicted RBP7.09□□□□□ -1.27
UBFD1-204ENST00000565634 STARD13Q9Y3M8 1113 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 PCDHGC5Q9Y5F6 944 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 KAT6AQ92794 2004 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 ZNF292O60281 2723 aa7.09□□□□□ -1.27
UBFD1-204ENST00000565634 LOC730098B7Z3J9 87 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 TMEM232C9JQI7 657 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 PI15O43692 258 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 JAK2O60674 1132 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 PPP1R11O60927 126 aaPredicted RBP7.08□□□□□ -1.28
UBFD1-204ENST00000565634 BAIAP3O94812 1187 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 SNHG28P0DPA3 235 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 PDHBP11177 359 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 PCP11498 1178 aaKnown RBP7.08□□□□□ -1.28
UBFD1-204ENST00000565634 TCF3P15923 654 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 RFC2P35250 354 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 LIFRP42702 1097 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 NKX3-2P78367 333 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 ZNF200P98182 395 aaPredicted RBP7.08□□□□□ -1.28
UBFD1-204ENST00000565634 SCRN1Q12765 414 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms