RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 SSRP1Q08945 709 aaKnown RBP23.51■■□□□ 1.35
HERC2-204ENST00000563945 KCNC3Q14003 757 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 CLLU1OSQ5K130 101 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 SLC39A11Q8N1S5 342 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 FBXL16Q8N461 479 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 TBCKQ8TEA7 893 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 RSPH1Q8WYR4 309 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 NECTIN4Q96NY8 510 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 NID2Q14112 1375 aa23.51■■□□□ 1.35
HERC2-204ENST00000563945 CPLX1O14810 134 aa23.5■■□□□ 1.35
HERC2-204ENST00000563945 SFPQP23246 707 aaKnown RBP eCLIP23.5■■□□□ 1.35
HERC2-204ENST00000563945 BCAR1P56945 870 aa23.5■■□□□ 1.35
HERC2-204ENST00000563945 ITIH3Q06033 890 aa23.5■■□□□ 1.35
HERC2-204ENST00000563945 NTRK3Q16288 839 aa23.5■■□□□ 1.35
HERC2-204ENST00000563945 UGCGQ16739 394 aa23.5■■□□□ 1.35
HERC2-204ENST00000563945 IER5LQ5T953 404 aa23.5■■□□□ 1.35
HERC2-204ENST00000563945 TWF2Q6IBS0 349 aaKnown RBP23.5■■□□□ 1.35
HERC2-204ENST00000563945 PRSS33Q8NF86 280 aa23.5■■□□□ 1.35
HERC2-204ENST00000563945 DDX11L8A8MPP1 907 aa23.49■■□□□ 1.35
HERC2-204ENST00000563945 NT5C1B-RDH14C9J2C7 533 aa23.49■■□□□ 1.35
HERC2-204ENST00000563945 CSDE1O75534 798 aaKnown RBP23.49■■□□□ 1.35
HERC2-204ENST00000563945 REC8O95072 547 aa23.49■■□□□ 1.35
HERC2-204ENST00000563945 PDIA3P30101 505 aaKnown RBP23.49■■□□□ 1.35
HERC2-204ENST00000563945 Q4G0T1 1027 aa23.49■■□□□ 1.35
HERC2-204ENST00000563945 ZNF598Q86UK7 904 aaKnown RBP23.49■■□□□ 1.35
HERC2-204ENST00000563945 JPH2Q9BR39 696 aaPredicted RBP23.49■■□□□ 1.35
HERC2-204ENST00000563945 NIFKQ9BYG3 293 aaKnown RBP23.49■■□□□ 1.35
HERC2-204ENST00000563945 IRF2BPLQ9H1B7 796 aa23.49■■□□□ 1.35
HERC2-204ENST00000563945 NCOA5Q9HCD5 579 aaKnown RBP23.49■■□□□ 1.35
HERC2-204ENST00000563945 HCFC2Q9Y5Z7 792 aa23.49■■□□□ 1.35
HERC2-204ENST00000563945 ZDBF2Q9HCK1 2354 aa23.48■■□□□ 1.35
HERC2-204ENST00000563945 A0A087WZ62 844 aa23.48■■□□□ 1.35
HERC2-204ENST00000563945 C2orf71A6NGG8 1288 aa23.48■■□□□ 1.35
HERC2-204ENST00000563945 RNASELQ05823 741 aaKnown RBP23.48■■□□□ 1.35
HERC2-204ENST00000563945 TARBP2Q15633 366 aaKnown RBP23.48■■□□□ 1.35
HERC2-204ENST00000563945 CPLX2Q6PUV4 134 aaKnown RBP23.48■■□□□ 1.35
HERC2-204ENST00000563945 GLB1LQ6UWU2 654 aa23.48■■□□□ 1.35
HERC2-204ENST00000563945 GJA10Q969M2 543 aa23.48■■□□□ 1.35
HERC2-204ENST00000563945 RIPOR3Q96MK2 946 aa23.48■■□□□ 1.35
HERC2-204ENST00000563945 FDXACB1Q9BRP7 624 aaPredicted RBP23.48■■□□□ 1.35
HERC2-204ENST00000563945 AGXT2Q9BYV1 514 aa23.48■■□□□ 1.35
HERC2-204ENST00000563945 ADAM7Q9H2U9 754 aa23.48■■□□□ 1.35
HERC2-204ENST00000563945 SUCLA2Q9P2R7 463 aaPredicted RBP23.48■■□□□ 1.35
HERC2-204ENST00000563945 PCDHA4Q9UN74 947 aa23.48■■□□□ 1.35
HERC2-204ENST00000563945 ZC3H11AO75152 810 aaKnown RBP eCLIP23.47■■□□□ 1.35
HERC2-204ENST00000563945 PSMD10O75832 226 aa23.47■■□□□ 1.35
HERC2-204ENST00000563945 MTHFRP42898 656 aa23.47■■□□□ 1.35
HERC2-204ENST00000563945 PHKA2P46019 1235 aa23.47■■□□□ 1.35
HERC2-204ENST00000563945 CATSPER4Q7RTX7 472 aa23.47■■□□□ 1.35
HERC2-204ENST00000563945 ZNF410Q86VK4 478 aa23.47■■□□□ 1.35
HERC2-204ENST00000563945 RHPN2Q8IUC4 686 aa23.47■■□□□ 1.35
HERC2-204ENST00000563945 VPS52Q8N1B4 723 aa23.47■■□□□ 1.35
HERC2-204ENST00000563945 PIN4Q9Y237 131 aaKnown RBP23.47■■□□□ 1.35
HERC2-204ENST00000563945 TRIOO75962 3097 aa23.47■■□□□ 1.35
HERC2-204ENST00000563945 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.46■■□□□ 1.35
HERC2-204ENST00000563945 CLASP2O75122 1294 aaKnown RBP23.46■■□□□ 1.35
HERC2-204ENST00000563945 AVPR2P30518 371 aa23.46■■□□□ 1.35
HERC2-204ENST00000563945 DRP2Q13474 957 aa23.46■■□□□ 1.35
HERC2-204ENST00000563945 GIT2Q14161 759 aa23.46■■□□□ 1.35
HERC2-204ENST00000563945 LONRF3Q496Y0 759 aa23.46■■□□□ 1.35
HERC2-204ENST00000563945 BLIDQ8IZY5 108 aa23.46■■□□□ 1.35
HERC2-204ENST00000563945 INPP5FQ9Y2H2 1132 aa23.46■■□□□ 1.35
HERC2-204ENST00000563945 SPDYE4A6NLX3 237 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 DKC1O60832 514 aaKnown RBP eCLIP23.45■■□□□ 1.34
HERC2-204ENST00000563945 TDP2O95551 362 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 MTMR3Q13615 1198 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 ATAT1Q5SQI0 421 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 KREMEN2Q8NCW0 462 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 PGBD4Q96DM1 585 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 ASIC4Q96FT7 647 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 NLRP4Q96MN2 994 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 SH2D3AQ9BRG2 576 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 SLKQ9H2G2 1235 aaPredicted RBP23.45■■□□□ 1.34
HERC2-204ENST00000563945 DZANK1Q9NVP4 752 aa23.45■■□□□ 1.34
HERC2-204ENST00000563945 WDR81Q562E7 1941 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 CYP3A7-CYP3A51PA0A087WV96 503 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 EDIL3O43854 480 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 DEXIO95424 95 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 CYP3A7P24462 503 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 RAB27AP51159 221 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 POLGP54098 1239 aaPredicted RBP23.44■■□□□ 1.34
HERC2-204ENST00000563945 EVCP57679 992 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 PSMC5P62195 406 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 NONOQ15233 471 aaKnown RBP eCLIP23.44■■□□□ 1.34
HERC2-204ENST00000563945 NOMO2Q5JPE7 1267 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 RARS2Q5T160 578 aaKnown RBP23.44■■□□□ 1.34
HERC2-204ENST00000563945 GALNT17Q6IS24 598 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 RUFY3Q7L099 469 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 EXOC8Q8IYI6 725 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 UBALD2Q8IYN6 164 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 LPPQ93052 612 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 TRAIPQ9BWF2 469 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 GBP3Q9H0R5 595 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 POMKQ9H5K3 350 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 DDX25Q9UHL0 483 aaKnown RBP23.44■■□□□ 1.34
HERC2-204ENST00000563945 DBR1Q9UK59 544 aaKnown RBP23.44■■□□□ 1.34
HERC2-204ENST00000563945 SORCS3Q9UPU3 1222 aa23.44■■□□□ 1.34
HERC2-204ENST00000563945 IGKV6-21A0A0C4DH24 114 aa23.43■■□□□ 1.34
HERC2-204ENST00000563945 TMEM150BA6NC51 233 aa23.43■■□□□ 1.34
HERC2-204ENST00000563945 MARCH6O60337 910 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms