RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 DDX11L8A8MPP1 907 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 NT5C1B-RDH14C9J2C7 533 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 ZC3H11AO75152 810 aaKnown RBP eCLIP14.6□□□□□ -0.07
SF3B3-202ENST00000562722 HOXB8P17481 243 aaPredicted RBP14.6□□□□□ -0.07
SF3B3-202ENST00000562722 BCAR1P56945 870 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 CDC42EP1Q00587 391 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 LONRF3Q496Y0 759 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 Q4G0T1 1027 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 TWF2Q6IBS0 349 aaKnown RBP14.6□□□□□ -0.07
SF3B3-202ENST00000562722 CES5AQ6NT32 575 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 SYCE2Q6PIF2 218 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 RHPN2Q8IUC4 686 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 SLC39A11Q8N1S5 342 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 FBXL6Q8N531 539 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 AGXT2Q9BYV1 514 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 S1PR5Q9H228 398 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 SUCLA2Q9P2R7 463 aaPredicted RBP14.6□□□□□ -0.07
SF3B3-202ENST00000562722 PIN4Q9Y237 131 aaKnown RBP14.6□□□□□ -0.07
SF3B3-202ENST00000562722 NR2E1Q9Y466 385 aa14.6□□□□□ -0.07
SF3B3-202ENST00000562722 A0A087WZ62 844 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 C2orf71A6NGG8 1288 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 EDIL3O43854 480 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 PSMD10O75832 226 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 PTPN5P54829 565 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 RNASELQ05823 741 aaKnown RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 KCNC3Q14003 757 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 TARBP2Q15633 366 aaKnown RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 PTPN21Q16825 1174 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 IER5LQ5T953 404 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 CPLX2Q6PUV4 134 aaKnown RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 RUFY3Q7L099 469 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 ZNF598Q86UK7 904 aaKnown RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 BLIDQ8IZY5 108 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 MRPL43Q8N983 215 aaKnown RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 PRSS33Q8NF86 280 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 NLRP4Q96MN2 994 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 PRRX2Q99811 253 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 FDXACB1Q9BRP7 624 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 NIFKQ9BYG3 293 aaKnown RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 INO80BQ9C086 356 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 SLKQ9H2G2 1235 aaPredicted RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 CHST12Q9NRB3 414 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 DDX25Q9UHL0 483 aaKnown RBP14.59□□□□□ -0.07
SF3B3-202ENST00000562722 INPP5FQ9Y2H2 1132 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 HCFC2Q9Y5Z7 792 aa14.59□□□□□ -0.07
SF3B3-202ENST00000562722 CLASP2O75122 1294 aaKnown RBP14.58□□□□□ -0.08
SF3B3-202ENST00000562722 DEXIO95424 95 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 CXCL14O95715 111 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 SKIP12755 728 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 PHKA2P46019 1235 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 STK3Q13188 491 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 NONOQ15233 471 aaKnown RBP eCLIP14.58□□□□□ -0.08
SF3B3-202ENST00000562722 GLB1LQ6UWU2 654 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 CATSPER4Q7RTX7 472 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 ZNF410Q86VK4 478 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 LPPQ93052 612 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 LARP6Q9BRS8 491 aaKnown RBP14.58□□□□□ -0.08
SF3B3-202ENST00000562722 GBP3Q9H0R5 595 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 CDH22Q9UJ99 828 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 CYP46A1Q9Y6A2 500 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 TECTAO75443 2155 aa14.58□□□□□ -0.08
SF3B3-202ENST00000562722 PIEZO1Q92508 2521 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 CYP3A7-CYP3A51PA0A087WV96 503 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 SPDYE4A6NLX3 237 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 CYP3A7P24462 503 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 EVCP57679 992 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 PSMC5P62195 406 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 ITIH3Q06033 890 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 TOB2Q14106 344 aaPredicted RBP14.57□□□□□ -0.08
SF3B3-202ENST00000562722 INF2Q27J81 1249 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 LETM2Q2VYF4 491 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 PLA2G4FQ68DD2 849 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 KSR1Q8IVT5 923 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 VPS52Q8N1B4 723 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 AUTS2Q8WXX7 1259 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 RIPOR3Q96MK2 946 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 NECTIN4Q96NY8 510 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 JPH2Q9BR39 696 aaPredicted RBP14.57□□□□□ -0.08
SF3B3-202ENST00000562722 ADAM7Q9H2U9 754 aa14.57□□□□□ -0.08
SF3B3-202ENST00000562722 CCDC194A0A1B0GVG4 234 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 MARCH6O60337 910 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 MAFO75444 373 aaPredicted RBP14.56□□□□□ -0.08
SF3B3-202ENST00000562722 WEE2P0C1S8 567 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 RAB27AP51159 221 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 NOMO2Q5JPE7 1267 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 RARS2Q5T160 578 aaKnown RBP14.56□□□□□ -0.08
SF3B3-202ENST00000562722 GALNT17Q6IS24 598 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 KRT25Q7Z3Z0 450 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 KREMEN2Q8NCW0 462 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 ETNPPLQ8TBG4 499 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 SLC7A3Q8WY07 619 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 RSPH1Q8WYR4 309 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 ASIC4Q96FT7 647 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 AIFM3Q96NN9 605 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 PHOX2BQ99453 314 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 POMKQ9H5K3 350 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 ZSWIM6Q9HCJ5 1215 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 FAM105AQ9NUU6 356 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 TBC1D13Q9NVG8 400 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms