RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 NLRP7Q8WX94 980 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 NLRP4Q96MN2 994 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 CLIC6Q96NY7 704 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 FDXACB1Q9BRP7 624 aaPredicted RBP17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 FTHL17Q9BXU8 183 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 CCSER1Q9C0I3 900 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 NT5C3AQ9H0P0 336 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 IFT122Q9HBG6 1241 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 COL4A6Q14031 1691 aa17.23■□□□□ 0.35
RABGGTA-219ENST00000560871 CHD7Q9P2D1 2997 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 MGEA5O60502 916 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 PPP6R2O75170 966 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 CYP11B2P19099 503 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 HTRA4P83105 476 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 LAMTOR4Q0VGL1 99 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 STK38Q15208 465 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 FOXD4L6Q3SYB3 417 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 FAM117BQ6P1L5 589 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 FOXD4L3Q6VB84 417 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 USP49Q70CQ1 688 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 SPRED2Q7Z698 418 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 MYOCDQ8IZQ8 938 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 MCPH1Q8NEM0 835 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 PPM1EQ8WY54 764 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 ARNTL2Q8WYA1 636 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 TOP1MTQ969P6 601 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 GCOM2Q9BZD3 368 aaPredicted RBP17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 GPRC5CQ9NQ84 441 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 TFIP11Q9UBB9 837 aaKnown RBP17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 ST3GAL5Q9UNP4 418 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 DNM3Q9UQ16 869 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 INSL6Q9Y581 213 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 NLRC5Q86WI3 1866 aa17.22■□□□□ 0.35
RABGGTA-219ENST00000560871 LINC01553A4QN01 128 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 GPR182O15218 404 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 SPTLC2O15270 562 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 GLRA2P23416 452 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 UBA7P41226 1012 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 ERVK-21P61565 698 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 DNM1Q05193 864 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 NFX1Q12986 1120 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 CAPSQ13938 189 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 KARSQ15046 597 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 CCDC85BQ15834 202 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 SPECC1Q5M775 1068 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 ODR4Q5SWX8 454 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 ATL3Q6DD88 541 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 FAM43BQ6ZT52 329 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 RTN4RL1Q86UN2 441 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 IFNLR1Q8IU57 520 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 KRI1Q8N9T8 703 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 SP7Q8TDD2 431 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 SYMPKQ92797 1274 aaKnown RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 EPSTI1Q96J88 318 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 SCLT1Q96NL6 688 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 POLR3FQ9H1D9 316 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 TSPYL2Q9H2G4 693 aaPredicted RBP17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 PRDM6Q9NQX0 595 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 MTCH2Q9Y6C9 303 aa17.21■□□□□ 0.35
RABGGTA-219ENST00000560871 EYSQ5T1H1 3165 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 ENPP3O14638 875 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 ASAP2O43150 1006 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 CSDE1O75534 798 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 PLCG1P19174 1290 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 FGFR4P22455 802 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 SLC12A3P55017 1021 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 DSC3Q14574 896 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 ZRSR1Q15695 479 aaKnown RBP17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 CRIPAKQ8N1N5 446 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 SYT2Q8N9I0 419 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 RNF149Q8NC42 400 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 CDK5RAP3Q96JB5 506 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 PLIN2Q99541 437 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 RUSC1Q9BVN2 902 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 COL25A1Q9BXS0 654 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 BLOC1S4Q9NUP1 217 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 DAXXQ9UER7 740 aaPredicted RBP17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 RALGAPA2Q2PPJ7 1873 aa17.2■□□□□ 0.34
RABGGTA-219ENST00000560871 TRANK1O15050 2925 aa17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 LPXNO60711 386 aa17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 PTENP60484 403 aa17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 POU5F1BQ06416 359 aa17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 RINT1Q6NUQ1 792 aa17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 MAEAQ7L5Y9 396 aa17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 CALML4Q96GE6 196 aa17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 TGS1Q96RS0 853 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 NFKBIZQ9BYH8 718 aa17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 MINDY3Q9H8M7 445 aa17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 RC3H2Q9HBD1 1191 aaKnown RBP17.19■□□□□ 0.34
RABGGTA-219ENST00000560871 GTPBP6O43824 516 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-219ENST00000560871 PLA2G4BP0C869 781 aa17.18■□□□□ 0.34
RABGGTA-219ENST00000560871 SRGAP2CP0DJJ0 459 aa17.18■□□□□ 0.34
RABGGTA-219ENST00000560871 SFPQP23246 707 aaKnown RBP eCLIP17.18■□□□□ 0.34
RABGGTA-219ENST00000560871 MAPK7Q13164 816 aa17.18■□□□□ 0.34
RABGGTA-219ENST00000560871 AXDND1Q5T1B0 1012 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-219ENST00000560871 FAM102BQ5T8I3 360 aa17.18■□□□□ 0.34
RABGGTA-219ENST00000560871 CDCA2Q69YH5 1023 aaPredicted RBP17.18■□□□□ 0.34
RABGGTA-219ENST00000560871 C1orf186Q6ZWK4 172 aa17.18■□□□□ 0.34
RABGGTA-219ENST00000560871 SRGAP1Q7Z6B7 1085 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms