RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 EXOC3L4Q17RC7 722 aa18.42■□□□□ 0.54
LDLR-206ENST00000557958 PDXDC1Q6P996 788 aa18.42■□□□□ 0.54
LDLR-206ENST00000557958 HAUS6Q7Z4H7 955 aa18.42■□□□□ 0.54
LDLR-206ENST00000557958 FBXO16Q8IX29 292 aaPredicted RBP18.42■□□□□ 0.54
LDLR-206ENST00000557958 EHBP1Q8NDI1 1231 aa18.42■□□□□ 0.54
LDLR-206ENST00000557958 DMAC2Q9NW81 257 aa18.42■□□□□ 0.54
LDLR-206ENST00000557958 ADGRA2Q96PE1 1338 aa18.42■□□□□ 0.54
LDLR-206ENST00000557958 IGSF9BQ9UPX0 1349 aa18.42■□□□□ 0.54
LDLR-206ENST00000557958 MYH11P35749 1972 aa18.42■□□□□ 0.54
LDLR-206ENST00000557958 ASB14A6NK59 587 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 LRRC53A6NM62 1247 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 EPHB6O15197 1021 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 CA12O43570 354 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 EXOC3O60645 756 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 SLU7O95391 586 aaKnown RBP18.41■□□□□ 0.54
LDLR-206ENST00000557958 NCKAP1LP55160 1127 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 NPEPPSP55786 919 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 SP2Q02086 613 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 ZNF792Q3KQV3 632 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 GBP6Q6ZN66 633 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 ZNF662Q6ZS27 426 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 CYFIP1Q7L576 1253 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 KIAA1328Q86T90 577 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 C12orf56Q8IXR9 622 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 CCDC155Q8N6L0 562 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 BAP1Q92560 729 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 SLC35C1Q96A29 364 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 SEPT9Q9UHD8 586 aaPredicted RBP18.41■□□□□ 0.54
LDLR-206ENST00000557958 KRT86O43790 486 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 ZNF862O60290 1169 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 SCP2P22307 547 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 CASP4P49662 377 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 CYP2J2P51589 502 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 PEX3P56589 373 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 RTP1P59025 263 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 SFMBT2Q5VUG0 894 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 ARMCX2Q7L311 632 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 CCDC60Q8IWA6 550 aaPredicted RBP18.41■□□□□ 0.54
LDLR-206ENST00000557958 ABRAQ8N0Z2 381 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 SPIRE2Q8WWL2 714 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 TSGA10Q9BZW7 698 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 ATP6V0A4Q9HBG4 840 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 ZNF302Q9NR11 478 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 KIAA1217Q5T5P2 1943 aa18.41■□□□□ 0.54
LDLR-206ENST00000557958 LCTP09848 1927 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 TMEM150BA6NC51 233 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 ATG7O95352 703 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 TBC1D8O95759 1140 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 KRT13P13646 458 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 POLR2FP61218 127 aaKnown RBP18.4■□□□□ 0.54
LDLR-206ENST00000557958 GRB14Q14449 540 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 LY6KQ17RY6 165 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 SLC9C1Q4G0N8 1177 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 KSR1Q8IVT5 923 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 ERO1AQ96HE7 468 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 CRACR2AQ9BSW2 395 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 CYP26B1Q9NR63 512 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 MYO6Q9UM54 1294 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 DAAM1Q9Y4D1 1078 aa18.4■□□□□ 0.54
LDLR-206ENST00000557958 SSU72P8A0A1W2PR75 194 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 SLC15A5A6NIM6 579 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 CCDC169A6NNP5 214 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 URI1O94763 535 aaPredicted RBP18.39■□□□□ 0.54
LDLR-206ENST00000557958 ALDH1A1P00352 501 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 UBA1P22314 1058 aaKnown RBP18.39■□□□□ 0.54
LDLR-206ENST00000557958 TUBB2AQ13885 445 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 FAM160B1Q5W0V3 765 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 BORCS6Q96GS4 357 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 IFT74Q96LB3 600 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 TUBB2BQ9BVA1 445 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 LUC7LQ9NQ29 371 aaKnown RBP18.39■□□□□ 0.54
LDLR-206ENST00000557958 KMT5AQ9NQR1 393 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 FBXL5Q9UKA1 691 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 TELO2Q9Y4R8 837 aa18.39■□□□□ 0.54
LDLR-206ENST00000557958 TNPO2O14787 897 aaKnown RBP18.39■□□□□ 0.53
LDLR-206ENST00000557958 SLC16A4O15374 487 aa18.39■□□□□ 0.53
LDLR-206ENST00000557958 AKR1B10O60218 316 aa18.39■□□□□ 0.53
LDLR-206ENST00000557958 INTS8Q75QN2 995 aaKnown RBP18.39■□□□□ 0.53
LDLR-206ENST00000557958 NPLOC4Q8TAT6 608 aa18.39■□□□□ 0.53
LDLR-206ENST00000557958 WDR24Q96S15 920 aa18.39■□□□□ 0.53
LDLR-206ENST00000557958 SH2D3AQ9BRG2 576 aa18.39■□□□□ 0.53
LDLR-206ENST00000557958 NLRC4Q9NPP4 1024 aa18.39■□□□□ 0.53
LDLR-206ENST00000557958 GPRC5CQ9NQ84 441 aa18.39■□□□□ 0.53
LDLR-206ENST00000557958 PDGFCQ9NRA1 345 aa18.39■□□□□ 0.53
LDLR-206ENST00000557958 SLC5A4Q9NY91 659 aa18.39■□□□□ 0.53
LDLR-206ENST00000557958 MAFBQ9Y5Q3 323 aaPredicted RBP18.39■□□□□ 0.53
LDLR-206ENST00000557958 MAPK13O15264 365 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 NOL4O94818 638 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 OATP04181 439 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 SERPING1P05155 500 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 CYP2B6P20813 491 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 NPTX2P47972 431 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 TDRD12Q587J7 1177 aaKnown RBP18.38■□□□□ 0.53
LDLR-206ENST00000557958 FMNL3Q8IVF7 1028 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 MAML3Q96JK9 1138 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 SYNGAP1Q96PV0 1343 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 SPAG5Q96R06 1193 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 NTPCRQ9BSD7 190 aaKnown RBP18.38■□□□□ 0.53
LDLR-206ENST00000557958 MLXIPQ9HAP2 919 aa18.38■□□□□ 0.53
LDLR-206ENST00000557958 GCNT4Q9P109 453 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms