RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	MAN2A2	P49641	1150 aa		6.6	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	MAP3K12	Q12852	859 aa		6.6	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	FAM50A	Q14320	339 aa	Known RBP	6.6	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	CASC1	Q6TDU7	716 aa		6.6	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	HIPK4	Q8NE63	616 aa		6.6	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	LPP	Q93052	612 aa		6.6	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	SMURF1	Q9HCE7	757 aa		6.6	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	DDX56	Q9NY93	547 aa	Known RBP	6.6	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	VWA7	Q9Y334	891 aa		6.6	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	MASP1	P48740	699 aa		6.59	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	DNM2	P50570	870 aa		6.59	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	FAM43A	Q8N2R8	423 aa		6.59	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	CALML6	Q8TD86	181 aa		6.59	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	ASB15	Q8WXK1	588 aa		6.59	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	ZNF830	Q96NB3	372 aa	Predicted RBP	6.59	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	CDC6	Q99741	560 aa		6.59	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	CTDP1	Q9Y5B0	961 aa	Predicted RBP	6.59	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	MYO15B	Q96JP2	1530 aa		6.59	□□□□□ -1.35
RALGAPA1-215	ENST00000556839	WASHC2C	Q9Y4E1	1318 aa		6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	PRAMEF22	A3QJZ6	481 aa		6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	TRAF5	O00463	557 aa		6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SCD	O00767	359 aa		6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	DIAPH1	O60610	1272 aa	Known RBP	6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ATP2C1	P98194	919 aa	Predicted RBP	6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	C16orf86	Q6ZW13	317 aa		6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SPATC1	Q76KD6	591 aa		6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	HOMER1	Q86YM7	354 aa		6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ZC3H7A	Q8IWR0	971 aa	Known RBP	6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	GSPT2	Q8IYD1	628 aa	Known RBP	6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	HAS1	Q92839	578 aa		6.58	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	PPP1R12A	O14974	1030 aa	Predicted RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	RHOBTB3	O94955	611 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	GC	P02774	474 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	VIL1	P09327	827 aa	Known RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	FBL	P22087	321 aa	Known RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	APEX1	P27695	318 aa	Known RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ADRA1B	P35368	520 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	IL12RB1	P42701	662 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SUMO1	P63165	101 aa	Known RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	TOB2	Q14106	344 aa	Predicted RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SEC23A	Q15436	765 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ELAVL1	Q15717	326 aa	Known RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	CCDC142	Q17RM4	750 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	C2orf27A	Q580R0	203 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	KLHDC10	Q6PID8	442 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	CISD2	Q8N5K1	135 aa	Known RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	IPO9	Q96P70	1041 aa	Known RBP	6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	GBP4	Q96PP9	640 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SPATA9	Q9BWV2	254 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	GPR87	Q9BY21	358 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SLC6A15	Q9H2J7	730 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	TMEM51	Q9NW97	253 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	CHPF2	Q9P2E5	772 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ASB1	Q9Y576	335 aa		6.57	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	FOXP2	O15409	715 aa		6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	FAM20B	O75063	409 aa		6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	H2AFY	O75367	372 aa	Known RBP	6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	NUDT3	O95989	172 aa		6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	POU3F3	P20264	500 aa	Predicted RBP	6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ADCY7	P51828	1080 aa		6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SESN2	P58004	480 aa	Predicted RBP	6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	MRGPRE	Q86SM8	312 aa		6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	NOSTRIN	Q8IVI9	506 aa		6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SLC25A43	Q8WUT9	341 aa	Predicted RBP	6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ZNF669	Q96BR6	464 aa	Predicted RBP	6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	FAM126A	Q9BYI3	521 aa	Predicted RBP	6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	KCNH7	Q9NS40	1196 aa		6.56	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	TRBV23-1	A0A0A0MS06	115 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	MAF	O75444	373 aa	Predicted RBP	6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	APP	P05067	770 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	MRPS21	P82921	87 aa	Known RBP	6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	LACTB	P83111	547 aa	Predicted RBP	6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ACAP1	Q15027	740 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	DALRD3	Q5D0E6	543 aa	Known RBP	6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	RINL	Q6ZS11	566 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	GAREM2	Q75VX8	874 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	EGFL6	Q8IUX8	553 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SYNE4	Q8N205	404 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	THAP3	Q8WTV1	239 aa	Predicted RBP	6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	GCDH	Q92947	438 aa	Predicted RBP	6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	RPL10L	Q96L21	214 aa	Known RBP	6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	FEZ1	Q99689	392 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	PCDHA9	Q9Y5H5	950 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	PTCH2	Q9Y6C5	1203 aa		6.55	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	TCERG1	O14776	1098 aa	Known RBP	6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	PROZ	P22891	400 aa		6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SMAD3	P84022	425 aa	Known RBP	6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	MYBPC2	Q14324	1141 aa		6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	TM4SF20	Q53R12	229 aa		6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	CC2D1B	Q5T0F9	858 aa	Known RBP	6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	MBNL2	Q5VZF2	373 aa	Known RBP	6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	FAM111B	Q6SJ93	734 aa		6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	FAM9B	Q8IZU0	186 aa		6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	BCL6B	Q8N143	479 aa	Predicted RBP	6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	ANKRD53	Q8N9V6	530 aa		6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	GFM2	Q969S9	779 aa	Known RBP	6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	NAF1	Q96HR8	494 aa	Known RBP	6.54	□□□□□ -1.36
RALGAPA1-215	ENST00000556839	SLK	Q9H2G2	1235 aa	Predicted RBP	6.54	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms