RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 SARSP49591 514 aaKnown RBP25.28■■□□□ 1.64
PABPN1-207ENST00000556821 GATMP50440 423 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 DNM2P50570 870 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 EMC2Q15006 297 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 OTUD6AQ7L8S5 288 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 RHPN2Q8IUC4 686 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 FDXACB1Q9BRP7 624 aaPredicted RBP25.28■■□□□ 1.64
PABPN1-207ENST00000556821 UBE2ZQ9H832 354 aaPredicted RBP25.28■■□□□ 1.64
PABPN1-207ENST00000556821 XPNPEP1Q9NQW7 623 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 C1orf112Q9NSG2 853 aa25.28■■□□□ 1.64
PABPN1-207ENST00000556821 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.28■■□□□ 1.64
PABPN1-207ENST00000556821 DENND3A2RUS2 1198 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 MED24O75448 989 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 EPC2Q52LR7 807 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 MCTP1Q6DN14 999 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 SLC24A5Q71RS6 500 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 ZNF410Q86VK4 478 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 FIBCD1Q8N539 461 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 FBXO22Q8NEZ5 403 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 TMEM143Q96AN5 459 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 FBXL18Q96ME1 805 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 SAMD11Q96NU1 681 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 ANKEF1Q9NU02 776 aa25.27■■□□□ 1.64
PABPN1-207ENST00000556821 A0A087WWV3 80 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 STAG3L1P0CL83 205 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 ALADP13716 330 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 CDC42EP1Q00587 391 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 CATSPER3Q86XQ3 398 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 TMEM192Q8IY95 271 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 NLRP4Q96MN2 994 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 IFT122Q9HBG6 1241 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 TUFT1Q9NNX1 390 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 EIF4ENIF1Q9NRA8 985 aaKnown RBP25.26■■□□□ 1.63
PABPN1-207ENST00000556821 COL4A3BPQ9Y5P4 624 aa25.26■■□□□ 1.63
PABPN1-207ENST00000556821 TDRD15B5MCY1 1934 aaKnown RBP25.25■■□□□ 1.63
PABPN1-207ENST00000556821 IBSPP21815 317 aaPredicted RBP25.25■■□□□ 1.63
PABPN1-207ENST00000556821 RARRES1P49788 294 aa25.25■■□□□ 1.63
PABPN1-207ENST00000556821 FXR2P51116 673 aaKnown RBP eCLIP25.25■■□□□ 1.63
PABPN1-207ENST00000556821 PTGDRQ13258 359 aa25.25■■□□□ 1.63
PABPN1-207ENST00000556821 BTG3Q14201 252 aaPredicted RBP25.25■■□□□ 1.63
PABPN1-207ENST00000556821 CMTR2Q8IYT2 770 aaKnown RBP25.25■■□□□ 1.63
PABPN1-207ENST00000556821 PIGOQ8TEQ8 1089 aa25.25■■□□□ 1.63
PABPN1-207ENST00000556821 GCOM2Q9BZD3 368 aaPredicted RBP25.25■■□□□ 1.63
PABPN1-207ENST00000556821 H3BQV1 296 aa25.24■■□□□ 1.63
PABPN1-207ENST00000556821 GAS2O43903 313 aaKnown RBP25.24■■□□□ 1.63
PABPN1-207ENST00000556821 FAM189BP81408 668 aa25.24■■□□□ 1.63
PABPN1-207ENST00000556821 EXOC8Q8IYI6 725 aa25.24■■□□□ 1.63
PABPN1-207ENST00000556821 PRPF31Q8WWY3 499 aaKnown RBP25.24■■□□□ 1.63
PABPN1-207ENST00000556821 PSPC1Q8WXF1 523 aaKnown RBP25.24■■□□□ 1.63
PABPN1-207ENST00000556821 CLP1Q92989 425 aaKnown RBP25.24■■□□□ 1.63
PABPN1-207ENST00000556821 MTRQ99707 1265 aa25.24■■□□□ 1.63
PABPN1-207ENST00000556821 POLR3CQ9BUI4 534 aaPredicted RBP25.24■■□□□ 1.63
PABPN1-207ENST00000556821 LRFN2Q9ULH4 789 aa25.24■■□□□ 1.63
PABPN1-207ENST00000556821 MRPL42Q9Y6G3 142 aaKnown RBP25.24■■□□□ 1.63
PABPN1-207ENST00000556821 PAN2Q504Q3 1202 aaKnown RBP25.23■■□□□ 1.63
PABPN1-207ENST00000556821 LARP1BQ659C4 914 aaKnown RBP25.23■■□□□ 1.63
PABPN1-207ENST00000556821 POTEGQ6S5H5 508 aa25.23■■□□□ 1.63
PABPN1-207ENST00000556821 FERMT3Q86UX7 667 aa25.23■■□□□ 1.63
PABPN1-207ENST00000556821 PCDHB7Q9Y5E2 793 aa25.23■■□□□ 1.63
PABPN1-207ENST00000556821 C5orf67F2Z3F1 127 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 H3BNC9 293 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 XRCC6P12956 609 aaKnown RBP eCLIP25.22■■□□□ 1.634e-16■■■□□ 18.2
PABPN1-207ENST00000556821 IL9P15248 144 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 RPA1P27694 616 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 LAMTOR4Q0VGL1 99 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 IL17AQ16552 155 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 RILPL1Q5EBL4 403 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 IGSF22Q8N9C0 903 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 TCP11Q8WWU5 503 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 ELAC1Q9H777 363 aaKnown RBP25.22■■□□□ 1.63
PABPN1-207ENST00000556821 RNF19AQ9NV58 838 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 TMEM161AQ9NX61 479 aa25.22■■□□□ 1.63
PABPN1-207ENST00000556821 GRXCR2A6NFK2 248 aa25.21■■□□□ 1.63
PABPN1-207ENST00000556821 DGAT1O75907 488 aa25.21■■□□□ 1.63
PABPN1-207ENST00000556821 ZSCAN20P17040 1043 aaPredicted RBP25.21■■□□□ 1.63
PABPN1-207ENST00000556821 SFPQP23246 707 aaKnown RBP eCLIP25.21■■□□□ 1.63
PABPN1-207ENST00000556821 CTNNB1P35222 781 aa25.21■■□□□ 1.63
PABPN1-207ENST00000556821 FAM102BQ5T8I3 360 aa25.21■■□□□ 1.63
PABPN1-207ENST00000556821 ERMNQ8TAM6 284 aa25.21■■□□□ 1.63
PABPN1-207ENST00000556821 MINDY3Q9H8M7 445 aa25.21■■□□□ 1.63
PABPN1-207ENST00000556821 ATP6V0A4Q9HBG4 840 aa25.21■■□□□ 1.63
PABPN1-207ENST00000556821 LAD1O00515 517 aa25.2■■□□□ 1.62
PABPN1-207ENST00000556821 FGFR1P11362 822 aa25.2■■□□□ 1.62
PABPN1-207ENST00000556821 ATF7P17544 494 aaPredicted RBP25.2■■□□□ 1.62
PABPN1-207ENST00000556821 BMPR1AP36894 532 aa25.2■■□□□ 1.62
PABPN1-207ENST00000556821 PRPHP41219 470 aa25.2■■□□□ 1.62
PABPN1-207ENST00000556821 GPM6BQ13491 265 aa25.2■■□□□ 1.62
PABPN1-207ENST00000556821 ECM1Q16610 540 aa25.2■■□□□ 1.62
PABPN1-207ENST00000556821 ECHDC2Q86YB7 292 aa25.2■■□□□ 1.62
PABPN1-207ENST00000556821 INO80BQ9C086 356 aaPredicted RBP25.2■■□□□ 1.62
PABPN1-207ENST00000556821 DBR1Q9UK59 544 aaKnown RBP25.2■■□□□ 1.62
PABPN1-207ENST00000556821 RWDD3Q9Y3V2 267 aa25.2■■□□□ 1.62
PABPN1-207ENST00000556821 TRIP11Q15643 1979 aa25.2■■□□□ 1.62
PABPN1-207ENST00000556821 USO1O60763 962 aaKnown RBP25.19■■□□□ 1.62
PABPN1-207ENST00000556821 SRGAP2CP0DJJ0 459 aa25.19■■□□□ 1.62
PABPN1-207ENST00000556821 ATP2C1P98194 919 aaPredicted RBP25.19■■□□□ 1.62
PABPN1-207ENST00000556821 HAUS3Q68CZ6 603 aa25.19■■□□□ 1.62
PABPN1-207ENST00000556821 ASAP3Q8TDY4 903 aa25.19■■□□□ 1.62
PABPN1-207ENST00000556821 CCDC43Q96MW1 224 aaKnown RBP25.19■■□□□ 1.62
PABPN1-207ENST00000556821 CHST12Q9NRB3 414 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms