RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ZMYND12Q9H0C1 365 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 SMOC2Q9H3U7 446 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 ANO2Q9NQ90 1003 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 EP300Q09472 2414 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 ESYT2A0FGR8 921 aa13.42□□□□□ -0.26
ACTN1-221ENST00000556571 OATP04181 439 aa13.42□□□□□ -0.26
ACTN1-221ENST00000556571 CIITAP33076 1130 aa13.42□□□□□ -0.26
ACTN1-221ENST00000556571 DDX53Q86TM3 631 aaKnown RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 REXO1Q8N1G1 1221 aaKnown RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 CCDC12Q8WUD4 166 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 NLRP7Q8WX94 980 aa13.42□□□□□ -0.26
ACTN1-221ENST00000556571 NKD2Q969F2 451 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 ACSF2Q96CM8 615 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 ZNF668Q96K58 619 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 TRAIPQ9BWF2 469 aa13.42□□□□□ -0.26
ACTN1-221ENST00000556571 GCOM2Q9BZD3 368 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 ZBP1Q9H171 429 aa13.42□□□□□ -0.26
ACTN1-221ENST00000556571 CYP26B1Q9NR63 512 aa13.42□□□□□ -0.26
ACTN1-221ENST00000556571 DISC1Q9NRI5 854 aa13.42□□□□□ -0.26
ACTN1-221ENST00000556571 FAM217BQ9NTX9 383 aaPredicted RBP13.42□□□□□ -0.26
ACTN1-221ENST00000556571 DMDP11532 3685 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 KLF18A0A0U1RQI7 1052 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 CCDC196A0A1B0GTZ2 297 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 ZNF862O60290 1169 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 ZC3H11AO75152 810 aaKnown RBP eCLIP13.41□□□□□ -0.26
ACTN1-221ENST00000556571 CTSAP10619 480 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 SKIP12755 728 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 EPCAMP16422 314 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 FGFR4P22455 802 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 GNA11P29992 359 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 CDC27P30260 824 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 PHKA2P46019 1235 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 PRKCEQ02156 737 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 TBC1D8BQ0IIM8 1120 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 FRMD5Q7Z6J6 570 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 CABP7Q86V35 215 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 PPFIBP1Q86W92 1011 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 SLC22A17Q8WUG5 538 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 AUTS2Q8WXX7 1259 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 IGSF21Q96ID5 467 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 TCEANC2Q96MN5 208 aa13.41□□□□□ -0.26
ACTN1-221ENST00000556571 PLXNA3P51805 1871 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 MYH9P35579 1960 aaKnown RBP13.4□□□□□ -0.26
ACTN1-221ENST00000556571 SFNP31947 248 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 ADD1P35611 737 aaKnown RBP13.4□□□□□ -0.26
ACTN1-221ENST00000556571 TSGA10IPQ3SY00 556 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 KANK3Q6NY19 840 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 GLB1LQ6UWU2 654 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 TMC5Q6UXY8 1006 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 OTOP3Q7RTS5 596 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 ERMP1Q7Z2K6 904 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 TMEM173Q86WV6 379 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-221ENST00000556571 FLCNQ8NFG4 579 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 BICD2Q8TD16 824 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 RIT2Q99578 217 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 INO80BQ9C086 356 aaPredicted RBP13.4□□□□□ -0.26
ACTN1-221ENST00000556571 SFXN1Q9H9B4 322 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 STK39Q9UEW8 545 aa13.4□□□□□ -0.26
ACTN1-221ENST00000556571 CSDE1O75534 798 aaKnown RBP13.39□□□□□ -0.27
ACTN1-221ENST00000556571 GALTP07902 379 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 AOC1P19801 751 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 SFPQP23246 707 aaKnown RBP eCLIP13.39□□□□□ -0.277e-7■■■■□ 21
ACTN1-221ENST00000556571 DNM2P50570 870 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 JAK3P52333 1124 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 RNASELQ05823 741 aaKnown RBP13.39□□□□□ -0.27
ACTN1-221ENST00000556571 TDGQ13569 410 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 TARBP2Q15633 366 aaKnown RBP13.39□□□□□ -0.27
ACTN1-221ENST00000556571 NOMO2Q5JPE7 1267 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 TWF2Q6IBS0 349 aaKnown RBP13.39□□□□□ -0.27
ACTN1-221ENST00000556571 CCDC149Q6ZUS6 474 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 GPR149Q86SP6 731 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 LENG9Q96B70 501 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 RTP3Q9BQQ7 232 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 NRDE2Q9H7Z3 1164 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
ACTN1-221ENST00000556571 NAP1L2Q9ULW6 460 aaPredicted RBP13.39□□□□□ -0.27
ACTN1-221ENST00000556571 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 ADAMTS3O15072 1205 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 MSH4O15457 936 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 PRPF3O43395 683 aaKnown RBP13.38□□□□□ -0.27
ACTN1-221ENST00000556571 GAS7O60861 476 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 ZNF623O75123 536 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 HMGB1P09429 215 aaKnown RBP13.38□□□□□ -0.27
ACTN1-221ENST00000556571 RAB27AP51159 221 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 USP11P51784 963 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 KRT32Q14532 448 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 PTPN14Q15678 1187 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 UGCGQ16739 394 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 XKR3Q5GH77 459 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 CWF19L1Q69YN2 538 aaKnown RBP13.38□□□□□ -0.27
ACTN1-221ENST00000556571 CCDC105Q8IYK2 499 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 ADSSL1Q8N142 457 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 LPPQ93052 612 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 TEKT3Q9BXF9 490 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 EMILIN2Q9BXX0 1053 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 NIFKQ9BYG3 293 aaKnown RBP13.38□□□□□ -0.27
ACTN1-221ENST00000556571 FAM105AQ9NUU6 356 aa13.38□□□□□ -0.27
ACTN1-221ENST00000556571 VPS13AQ96RL7 3174 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms