RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SMRP1Q8NCR6 262 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 MRPS27Q92552 414 aaKnown RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 GJA10Q969M2 543 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 CASD1Q96PB1 797 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 PPP1R16BQ96T49 567 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 MRPL9Q9BYD2 267 aaKnown RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 GCOM2Q9BZD3 368 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 TYW1Q9NV66 732 aaKnown RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 VAV3Q9UKW4 847 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 TPCN1Q9ULQ1 816 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 DENND4AQ7Z401 1863 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 TRIP11Q15643 1979 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 C2orf16Q68DN1 1984 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 EML1O00423 815 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 LINC01565O15544 149 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 DCXO43602 365 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 SLC37A4O43826 429 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 GAS2O43903 313 aaKnown RBP7.41□□□□□ -1.22
SLIRP-203ENST00000554074 ZNF623O75123 536 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 CTDNEP1O95476 244 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 GLP2RO95838 553 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 P4HBP07237 508 aaKnown RBP7.41□□□□□ -1.22
SLIRP-203ENST00000554074 GTF2F1P35269 517 aaKnown RBP eCLIP7.41□□□□□ -1.22
SLIRP-203ENST00000554074 PLA2G5P39877 138 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 RFC5P40937 340 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 NRIP1P48552 1158 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 NDUFV1P49821 464 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 RAB27AP51159 221 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 AK2P54819 239 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 DRP2Q13474 957 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 LETM2Q2VYF4 491 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 CLLU1OSQ5K130 101 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 KCNT2Q6UVM3 1135 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 LRRC55Q6ZSA7 311 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 C4orf19Q8IY42 314 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 SLFN12Q8IYM2 578 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 NLRP7Q8WX94 980 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 HAS1Q92839 578 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 GTF3C6Q969F1 213 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 ZNF558Q96NG5 402 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 SCLT1Q96NL6 688 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 LARP6Q9BRS8 491 aaKnown RBP7.41□□□□□ -1.22
SLIRP-203ENST00000554074 IGFLR1Q9H665 355 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 DHX33Q9H6R0 707 aaKnown RBP7.41□□□□□ -1.22
SLIRP-203ENST00000554074 TLE6Q9H808 572 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 NGRNQ9NPE2 291 aaKnown RBP7.41□□□□□ -1.22
SLIRP-203ENST00000554074 CYP26B1Q9NR63 512 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 CLEC1BQ9P126 229 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 ORC3Q9UBD5 711 aaPredicted RBP7.41□□□□□ -1.22
SLIRP-203ENST00000554074 PUF60Q9UHX1 559 aaKnown RBP7.41□□□□□ -1.22
SLIRP-203ENST00000554074 KCNJ14Q9UNX9 436 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 HCN4Q9Y3Q4 1203 aa7.41□□□□□ -1.22
SLIRP-203ENST00000554074 MYH11P35749 1972 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 A0A087WZ62 844 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 TMEM150BA6NC51 233 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 DDX11L8A8MPP1 907 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 CCNT1O60563 726 aaKnown RBP7.4□□□□□ -1.22
SLIRP-203ENST00000554074 SRGAP2BP0DMP2 458 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 ATF7P17544 494 aaPredicted RBP7.4□□□□□ -1.22
SLIRP-203ENST00000554074 KRT2P35908 639 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 PHKA2P46019 1235 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 ERVFC1P60507 584 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 KRT17Q04695 432 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 SPIRE1Q08AE8 756 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 KCNC3Q14003 757 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 CBX2Q14781 532 aaPredicted RBP7.4□□□□□ -1.22
SLIRP-203ENST00000554074 PCBP1Q15365 356 aaKnown RBP eCLIP7.4□□□□□ -1.22
SLIRP-203ENST00000554074 EPHA7Q15375 998 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 HERC4Q5GLZ8 1057 aaPredicted RBP7.4□□□□□ -1.22
SLIRP-203ENST00000554074 PIK3AP1Q6ZUJ8 805 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 SRGAP1Q7Z6B7 1085 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 SLC39A11Q8N1S5 342 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 MICAL1Q8TDZ2 1067 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 SLC7A3Q8WY07 619 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 TNFRSF25Q93038 417 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 FDXACB1Q9BRP7 624 aaPredicted RBP7.4□□□□□ -1.22
SLIRP-203ENST00000554074 IFT122Q9HBG6 1241 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 BRMS1Q9HCU9 246 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 SPG21Q9NZD8 308 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 SUCLA2Q9P2R7 463 aaPredicted RBP7.4□□□□□ -1.22
SLIRP-203ENST00000554074 HCSTQ9UBK5 93 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 COL4A3BPQ9Y5P4 624 aa7.4□□□□□ -1.22
SLIRP-203ENST00000554074 KMT2EQ8IZD2 1858 aa7.4□□□□□ -1.23
SLIRP-203ENST00000554074 PIEZO1Q92508 2521 aa7.4□□□□□ -1.23
SLIRP-203ENST00000554074 ZDBF2Q9HCK1 2354 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 LOC730098B7Z3J9 87 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 ASAP2O43150 1006 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 LYPLA2O95372 231 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 BAG4O95429 457 aaKnown RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 FDPSP14324 419 aaKnown RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 HOXB8P17481 243 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 IBSPP21815 317 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 FGFR4P22455 802 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 YWHABP31946 246 aaKnown RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 ALDH7A1P49419 539 aaKnown RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 POLGP54098 1239 aaPredicted RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 BMS1Q14692 1282 aaKnown RBP7.39□□□□□ -1.23
SLIRP-203ENST00000554074 CLUL1Q15846 466 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 ME3Q16798 604 aa7.39□□□□□ -1.23
SLIRP-203ENST00000554074 PLA2G4FQ68DD2 849 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms