RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TMOD1P28289 359 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 TECP42680 631 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 NPEPPSP55786 919 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 CBX2Q14781 532 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 INF2Q27J81 1249 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 PLA2G4FQ68DD2 849 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 KANK3Q6NY19 840 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 ANO5Q75V66 913 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 NLRP7Q8WX94 980 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 AUTS2Q8WXX7 1259 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 PHOX2BQ99453 314 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 POP1Q99575 1024 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 FDXACB1Q9BRP7 624 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 PLXNA3P51805 1871 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 DDX11L8A8MPP1 907 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 REC8O95072 547 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 SFNP31947 248 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 JAK3P52333 1124 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 NHLH1Q02575 133 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 EARS2Q5JPH6 523 aaKnown RBP13□□□□□ -0.33
PRPF40B-212ENST00000551111 ANKRD54Q6NXT1 300 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 TMEM184AQ6ZMB5 413 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 SLC39A11Q8N1S5 342 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 OXER1Q8TDS5 423 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 BCL7CQ8WUZ0 217 aaPredicted RBP13□□□□□ -0.33
PRPF40B-212ENST00000551111 ZNF274Q96GC6 653 aaPredicted RBP13□□□□□ -0.33
PRPF40B-212ENST00000551111 ZNF558Q96NG5 402 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 SCLT1Q96NL6 688 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 PHF7Q9BWX1 381 aaPredicted RBP13□□□□□ -0.33
PRPF40B-212ENST00000551111 ENTPD7Q9NQZ7 604 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 SPG21Q9NZD8 308 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 LZTS1Q9Y250 596 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 CYP46A1Q9Y6A2 500 aa13□□□□□ -0.33
PRPF40B-212ENST00000551111 DENND4AQ7Z401 1863 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 USP34Q70CQ2 3546 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 FAM205CA6NFA0 338 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 ZBTB39O15060 712 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 DEXIO95424 95 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 WEE2P0C1S8 567 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 AFF1P51825 1210 aaKnown RBP12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 BCAR1P56945 870 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 ZXDAP98168 799 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 SCRN1Q12765 414 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 XKR3Q5GH77 459 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 TRIM67Q6ZTA4 783 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 TMC7Q7Z402 723 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 RHPN2Q8IUC4 686 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 TRIM22Q8IYM9 498 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 LRRC43Q8N309 656 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 C12orf76Q8N812 135 aaPredicted RBP12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 DAGLBQ8NCG7 672 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 MINDY3Q9H8M7 445 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 BMP2KQ9NSY1 1161 aaPredicted RBP12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 SUCLA2Q9P2R7 463 aaPredicted RBP12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 VAV3Q9UKW4 847 aa12.99□□□□□ -0.33
PRPF40B-212ENST00000551111 TRIP11Q15643 1979 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 TMEM221A6NGB7 291 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 C2orf71A6NGG8 1288 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 M0R296 226 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 MAFO75444 373 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 CTDNEP1O95476 244 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 PHKA2P46019 1235 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 NONOQ15233 471 aaKnown RBP eCLIP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 LETM2Q2VYF4 491 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 PDE12Q6L8Q7 609 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 ABI1Q8IZP0 508 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 PRSS33Q8NF86 280 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 RDM1Q8NG50 284 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 HAS1Q92839 578 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 CDCA3Q99618 268 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 PHF20Q9BVI0 1012 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 GCOM2Q9BZD3 368 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 SMOC2Q9H3U7 446 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 NRDE2Q9H7Z3 1164 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 IFT122Q9HBG6 1241 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 RNF216Q9NWF9 866 aaPredicted RBP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 DNAJB4Q9UDY4 337 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 DDX25Q9UHL0 483 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 PUF60Q9UHX1 559 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 HCFC2Q9Y5Z7 792 aa12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 MTCL1Q9Y4B5 1905 aaKnown RBP12.98□□□□□ -0.33
PRPF40B-212ENST00000551111 CACNA1HO95180 2353 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 CPLX1O14810 134 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 HOXA2O43364 376 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 CLASP2O75122 1294 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 ZC3H11AO75152 810 aaKnown RBP eCLIP12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 EOMESO95936 686 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 PDGFBP01127 241 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 MRE11P49959 708 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 TWF2Q6IBS0 349 aaKnown RBP12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 FAM43BQ6ZT52 329 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 ZNF280BQ86YH2 543 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 PBXIP1Q96AQ6 731 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 NLRP4Q96MN2 994 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 POMKQ9H5K3 350 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 KCNMB3Q9NPA1 279 aa12.97□□□□□ -0.33
PRPF40B-212ENST00000551111 NGRNQ9NPE2 291 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms