RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 NMT1P30419 496 aaKnown RBP8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 HOXD13P35453 343 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 MYL5Q02045 173 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 PAK1Q13153 545 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 EMC2Q15006 297 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 L1TD1Q5T7N2 865 aaKnown RBP8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 MAP3K21Q5TCX8 1036 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 TTI2Q6NXR4 508 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 EPM2AIP1Q7L775 607 aaPredicted RBP8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 GUF1Q8N442 669 aaKnown RBP8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 ENOX1Q8TC92 643 aaKnown RBP8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 ATP8B4Q8TF62 1192 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 SCFD1Q8WVM8 642 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 BSNDQ8WZ55 320 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 GLG1Q92896 1179 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 FAM167AQ96KS9 214 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 CCDC43Q96MW1 224 aaKnown RBP8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 DUSP9Q99956 384 aaKnown RBP8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 TIPINQ9BVW5 301 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 SEMA6BQ9H3T3 888 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 RNPEPQ9H4A4 650 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 SMARCAD1Q9H4L7 1026 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 AZI2Q9H6S1 392 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 PARVGQ9HBI0 331 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 OLFML3Q9NRN5 406 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 SEL1LQ9UBV2 794 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 RWDD2AQ9UIY3 292 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 Q9Y3F1 56 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 COL4A3BPQ9Y5P4 624 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 ZMYM2Q9UBW7 1377 aa8.95□□□□□ -0.98
DEPDC4-207ENST00000549249 A6NJR5 290 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 SMTNL1A8MU46 457 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 BECN2A8MW95 431 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 HBP1O60381 514 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 DGAT1O75907 488 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 ZNF18P17022 549 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 CCNE1P24864 410 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 HOXD10P28358 340 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 SLC26A2P50443 739 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 BEX3Q00994 111 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 ZCWPW2Q504Y3 356 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 SPATA1Q5VX52 437 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 CENPPQ6IPU0 288 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 MYOCDQ8IZQ8 938 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 MYCT1Q8N699 235 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 PXYLP1Q8TE99 480 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 TRAPPC12Q8WVT3 735 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 KAT2BQ92831 832 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 P2RX5Q93086 422 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 ZBTB10Q96DT7 871 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 DHTKD1Q96HY7 919 aaPredicted RBP8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 STRA6Q9BX79 667 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 GTPBP4Q9BZE4 634 aaKnown RBP8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 POLR3FQ9H1D9 316 aaPredicted RBP8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 UPF3AQ9H1J1 476 aaKnown RBP8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 KCTD10Q9H3F6 313 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 ATP6V0A4Q9HBG4 840 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 SAMSN1Q9NSI8 373 aaKnown RBP8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 NRBP2Q9NSY0 501 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 FANCLQ9NW38 375 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 NFE2L3Q9Y4A8 694 aa8.94□□□□□ -0.98
DEPDC4-207ENST00000549249 IGKV6-21A0A0C4DH24 114 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 GOLGA6L19H0YKK7 550 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 H3BRB1 525 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 HAS3O00219 553 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 PSMA7O14818 248 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 EIF3DO15371 548 aaKnown RBP eCLIP8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 SEPT4O43236 478 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 DUSP11O75319 330 aaKnown RBP8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 PPFIA4O75335 1185 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 PRPF6O94906 941 aaKnown RBP8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 GCNT3O95395 438 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 F2P00734 622 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 GNRH1P01148 92 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 HMGCRP04035 888 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 ATP1A3P13637 1013 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 PLS3P13797 630 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 RFC5P40937 340 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 PPP1R2P41236 205 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 POLGP54098 1239 aaPredicted RBP8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 NCKAP1LP55160 1127 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 PEX3P56589 373 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 GJA9P57773 515 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 NKX3-2P78367 333 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 KCNA1Q09470 495 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 DRP2Q13474 957 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 STIM1Q13586 685 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 DGKDQ16760 1214 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 BMT2Q1RMZ1 405 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 ZC2HC1CQ53FD0 456 aaPredicted RBP8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 ODR4Q5SWX8 454 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 FAM102BQ5T8I3 360 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 PRPF38BQ5VTL8 546 aaKnown RBP8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 CDKAL1Q5VV42 579 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 ANKRD40Q6AI12 368 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 ZNF720Q7Z2F6 126 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 METTL3Q86U44 580 aaKnown RBP8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 KSR1Q8IVT5 923 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 NELFCDQ8IXH7 590 aa8.93□□□□□ -0.98
DEPDC4-207ENST00000549249 MCPH1Q8NEM0 835 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 480.8 ms