RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 PLCB1Q9NQ66 1216 aa16.07■□□□□ 0.16
DDX55-209ENST00000542286 FLOT1O75955 427 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 CALCAP01258 141 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 GCLMP48507 274 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 IRAK1P51617 712 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 KCTD16Q68DU8 428 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 PHLDB3Q6NSJ2 640 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 ZNF746Q6NUN9 644 aaPredicted RBP16.06■□□□□ 0.16
DDX55-209ENST00000542286 NIM1KQ8IY84 436 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 SLC20A1Q8WUM9 679 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 PGAP2Q9UHJ9 254 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 RIPK3Q9Y572 518 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 RBBP6Q7Z6E9 1792 aaKnown RBP16.06■□□□□ 0.16
DDX55-209ENST00000542286 CENPFP49454 3210 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 GOLGA6BA6NDN3 693 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 DHX15O43143 795 aaKnown RBP16.06■□□□□ 0.16
DDX55-209ENST00000542286 RAD51CO43502 376 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 CCDC172P0C7W6 258 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 PRLRP16471 622 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 PTGER2P43116 358 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 MTMR2Q13614 643 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 FAM76AQ8TAV0 307 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 GPR88Q9GZN0 384 aa16.06■□□□□ 0.16
DDX55-209ENST00000542286 F8VZ95 297 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 ZBTB7AO95365 584 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 GALCP54803 685 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 RPS6P62753 249 aaKnown RBP16.05■□□□□ 0.16
DDX55-209ENST00000542286 KCNV1Q6PIU1 500 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 POTEAQ6S8J7 498 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 HS2ST1Q7LGA3 356 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 SH2D3CQ8N5H7 860 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 PLEKHO2Q8TD55 490 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 ARL8AQ96BM9 186 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 ARHGEF26Q96DR7 871 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 MYOZ2Q9NPC6 264 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 ZNRF3Q9ULT6 936 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 PHF20L1A8MW92 1017 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 KRT14P02533 472 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 GAP43P17677 238 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 USP8P40818 1118 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 LLGL1Q15334 1064 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 RPS6KA1Q15418 735 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 CCDC70Q6NSX1 233 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 CASKIN2Q8WXE0 1202 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 INTS2Q9H0H0 1204 aaKnown RBP16.05■□□□□ 0.16
DDX55-209ENST00000542286 DDX47Q9H0S4 455 aaKnown RBP16.05■□□□□ 0.16
DDX55-209ENST00000542286 FEM1BQ9UK73 627 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 NR2E1Q9Y466 385 aa16.05■□□□□ 0.16
DDX55-209ENST00000542286 TESPA1A2RU30 521 aaPredicted RBP16.04■□□□□ 0.16
DDX55-209ENST00000542286 FOXN3O00409 490 aaPredicted RBP16.04■□□□□ 0.16
DDX55-209ENST00000542286 SLC16A4O15374 487 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 MCM3P25205 808 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 PPP3CAQ08209 521 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 TKFCQ3LXA3 575 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 AADACL2Q6P093 401 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 B3GNT9Q6UX72 402 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 DAAM2Q86T65 1068 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 ARHGEF19Q8IW93 802 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 METTL13Q8N6R0 699 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 TPCN2Q8NHX9 752 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 BCAS4Q8TDM0 211 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
DDX55-209ENST00000542286 METTL14Q9HCE5 456 aaKnown RBP16.04■□□□□ 0.16
DDX55-209ENST00000542286 CEP83Q9Y592 693 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 EMSYQ7Z589 1322 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 GOLGA6CA6NDK9 693 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 BACH1O14867 736 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 SLC16A3O15427 465 aaKnown RBP16.04■□□□□ 0.16
DDX55-209ENST00000542286 KIF4AO95239 1232 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 ICAM1P05362 532 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 GOLGA6DP0CG33 693 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 DLK2Q6UY11 383 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 LRRC57Q8N9N7 239 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 SYTL5Q8TDW5 730 aaPredicted RBP16.04■□□□□ 0.16
DDX55-209ENST00000542286 ZKSCAN4Q969J2 545 aaPredicted RBP16.04■□□□□ 0.16
DDX55-209ENST00000542286 SAAL1Q96ER3 474 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 GOLGA6AQ9NYA3 693 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 FRMD4BQ9Y2L6 1034 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 ASNSP08243 561 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 ZNF131P52739 623 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 PEX3P56589 373 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 MTMR1Q13613 665 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 ZNF572Q7Z3I7 529 aaPredicted RBP16.04■□□□□ 0.16
DDX55-209ENST00000542286 CPNE8Q86YQ8 564 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 RTKN2Q8IZC4 609 aa16.04■□□□□ 0.16
DDX55-209ENST00000542286 ATMINO43313 823 aaPredicted RBP16.03■□□□□ 0.16
DDX55-209ENST00000542286 H2AFZP0C0S5 128 aa16.03■□□□□ 0.16
DDX55-209ENST00000542286 MYL7Q01449 175 aa16.03■□□□□ 0.16
DDX55-209ENST00000542286 ZNF211Q13398 564 aaPredicted RBP16.03■□□□□ 0.16
DDX55-209ENST00000542286 H2AFVQ71UI9 128 aa16.03■□□□□ 0.16
DDX55-209ENST00000542286 CELF4Q9BZC1 486 aaKnown RBP16.03■□□□□ 0.16
DDX55-209ENST00000542286 LUC7LQ9NQ29 371 aaKnown RBP16.03■□□□□ 0.16
DDX55-209ENST00000542286 EIF3DO15371 548 aaKnown RBP eCLIP16.03■□□□□ 0.16
DDX55-209ENST00000542286 CCNE2O96020 404 aa16.03■□□□□ 0.16
DDX55-209ENST00000542286 SOX5P35711 763 aa16.03■□□□□ 0.16
DDX55-209ENST00000542286 STAT1P42224 750 aa16.03■□□□□ 0.16
DDX55-209ENST00000542286 RARRES1P49788 294 aa16.03■□□□□ 0.16
DDX55-209ENST00000542286 HSD17B4P51659 736 aa16.03■□□□□ 0.16
DDX55-209ENST00000542286 MKRN4PQ13434 485 aaPredicted RBP16.03■□□□□ 0.16
DDX55-209ENST00000542286 PRKG1Q13976 671 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms