RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 LOC730098B7Z3J9 87 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 EOMESO95936 686 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 ATF7P17544 494 aaPredicted RBP15.87■□□□□ 0.13
SNHG1-213ENST00000540725 DNM2P50570 870 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 CDC42EP1Q00587 391 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 HFE2Q6ZVN8 426 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 HELQQ8TDG4 1101 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 NGRNQ9NPE2 291 aaKnown RBP15.87■□□□□ 0.13
SNHG1-213ENST00000540725 SPG21Q9NZD8 308 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 KCNJ14Q9UNX9 436 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 A0A087WZ62 844 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 DDX11L8A8MPP1 907 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 HIDE1A8MVS5 230 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 SLC37A4O43826 429 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 SRGAP2BP0DMP2 458 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 KRT17Q04695 432 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 KCNC3Q14003 757 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 CBX2Q14781 532 aaPredicted RBP15.87■□□□□ 0.13
SNHG1-213ENST00000540725 LETM2Q2VYF4 491 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 TMC7Q7Z402 723 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 SUSD6Q92537 303 aa15.87■□□□□ 0.13
SNHG1-213ENST00000540725 FDXACB1Q9BRP7 624 aaPredicted RBP15.87■□□□□ 0.13
SNHG1-213ENST00000540725 PHF7Q9BWX1 381 aaPredicted RBP15.87■□□□□ 0.13
SNHG1-213ENST00000540725 MRPL9Q9BYD2 267 aaKnown RBP15.87■□□□□ 0.13
SNHG1-213ENST00000540725 SUCLA2Q9P2R7 463 aaPredicted RBP15.87■□□□□ 0.13
SNHG1-213ENST00000540725 CCDC194A0A1B0GVG4 234 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 EML1O00423 815 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 MAFO75444 373 aaPredicted RBP15.86■□□□□ 0.13
SNHG1-213ENST00000540725 CDKL5O76039 1030 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 SFPQP23246 707 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNHG1-213ENST00000540725 TECP42680 631 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 PSMC5P62195 406 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 TMEM184AQ6ZMB5 413 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 ANO5Q75V66 913 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 ZNF410Q86VK4 478 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 RHPN2Q8IUC4 686 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 SLC39A11Q8N1S5 342 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 EDAQ92838 391 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 PHF20Q9BVI0 1012 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 CHST12Q9NRB3 414 aa15.86■□□□□ 0.13
SNHG1-213ENST00000540725 CACNA1HO95180 2353 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 PHKA2P46019 1235 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 SCRN1Q12765 414 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 PPP2R5CQ13362 524 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 PLA2G4FQ68DD2 849 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 TWF2Q6IBS0 349 aaKnown RBP15.85■□□□□ 0.13
SNHG1-213ENST00000540725 ANKRD54Q6NXT1 300 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 LLGL2Q6P1M3 1020 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 NEK8Q86SG6 692 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 RPGRIP1Q96KN7 1286 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 JPH2Q9BR39 696 aaPredicted RBP15.85■□□□□ 0.13
SNHG1-213ENST00000540725 TRAIPQ9BWF2 469 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 INO80BQ9C086 356 aaPredicted RBP15.85■□□□□ 0.13
SNHG1-213ENST00000540725 KCNMB3Q9NPA1 279 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 VAV3Q9UKW4 847 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 PIN4Q9Y237 131 aaKnown RBP15.85■□□□□ 0.13
SNHG1-213ENST00000540725 STK36Q9NRP7 1315 aa15.85■□□□□ 0.13
SNHG1-213ENST00000540725 GCFC2P16383 781 aaKnown RBP15.84■□□□□ 0.13
SNHG1-213ENST00000540725 QARSP47897 775 aaKnown RBP15.84■□□□□ 0.13
SNHG1-213ENST00000540725 BCAR1P56945 870 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 SMC1AQ14683 1233 aaKnown RBP15.84■□□□□ 0.13
SNHG1-213ENST00000540725 PPP4R3AQ6IN85 833 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 SYCE2Q6PIF2 218 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 CATSPER4Q7RTX7 472 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 KSR1Q8IVT5 923 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 LPPQ93052 612 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 MFSD14AQ96MC6 490 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 FAM20AQ96MK3 541 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 NLRP4Q96MN2 994 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 APOL5Q9BWW9 433 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 S1PR5Q9H228 398 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 KCNH6Q9H252 994 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 SLKQ9H2G2 1235 aaPredicted RBP15.84■□□□□ 0.13
SNHG1-213ENST00000540725 CYP26B1Q9NR63 512 aa15.84■□□□□ 0.13
SNHG1-213ENST00000540725 NT5C1B-RDH14C9J2C7 533 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 DKC1O60832 514 aaKnown RBP eCLIP15.83■□□□□ 0.125e-7■■□□□ 13.2
SNHG1-213ENST00000540725 SKIP12755 728 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 HOXB8P17481 243 aaPredicted RBP15.83■□□□□ 0.12
SNHG1-213ENST00000540725 XBP1P17861 261 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 ALDH7A1P49419 539 aaKnown RBP15.83■□□□□ 0.12
SNHG1-213ENST00000540725 NPEPPSP55786 919 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 LONRF3Q496Y0 759 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 TRIM67Q6ZTA4 783 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 MRPL43Q8N983 215 aaKnown RBP15.83■□□□□ 0.12
SNHG1-213ENST00000540725 RSPH1Q8WYR4 309 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 TMEM169Q96HH4 297 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 GJB4Q9NTQ9 266 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 FAM105AQ9NUU6 356 aa15.83■□□□□ 0.12
SNHG1-213ENST00000540725 KMT2EQ8IZD2 1858 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 TMEM221A6NGB7 291 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 C2orf71A6NGG8 1288 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 M0R296 226 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 CCNT1O60563 726 aaKnown RBP15.82■□□□□ 0.12
SNHG1-213ENST00000540725 PFKFB2O60825 505 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 DTNBO60941 627 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 ZC3H11AO75152 810 aaKnown RBP eCLIP15.82■□□□□ 0.121e-6■■□□□ 11.7
SNHG1-213ENST00000540725 P4HBP07237 508 aaKnown RBP15.82■□□□□ 0.12
SNHG1-213ENST00000540725 RAB27AP51159 221 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 ZXDAP98168 799 aa15.82■□□□□ 0.12
SNHG1-213ENST00000540725 GLB1LQ6UWU2 654 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 150.4 ms