RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 LOXHD1Q8IVV2 1947 aa12.54□□□□□ -0.4
C11orf54-214ENST00000540113 F8VZ95 297 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 EIF3DO15371 548 aaKnown RBP eCLIP12.53□□□□□ -0.4
C11orf54-214ENST00000540113 EXOC3O60645 756 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 FLOT1O75955 427 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 H2AFZP0C0S5 128 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 PRKCIP41743 596 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 ZNF131P52739 623 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 SETQ01105 290 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-214ENST00000540113 MAPK7Q13164 816 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 H2AFVQ71UI9 128 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 DAAM2Q86T65 1068 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 FAM76AQ8TAV0 307 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 ELMO3Q96BJ8 720 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 GPR88Q9GZN0 384 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 DDX47Q9H0S4 455 aaKnown RBP12.53□□□□□ -0.4
C11orf54-214ENST00000540113 CHORDC1Q9UHD1 332 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-214ENST00000540113 BZW2Q9Y6E2 419 aaKnown RBP12.53□□□□□ -0.4
C11orf54-214ENST00000540113 K7ENM7 598 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 NFKBIEO00221 500 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 TRIM66O15016 1216 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 SOX5P35711 763 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 STAT1P42224 750 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 ZNF280AP59817 542 aaPredicted RBP12.53□□□□□ -0.4
C11orf54-214ENST00000540113 NAA35Q5VZE5 725 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 PADI6Q6TGC4 694 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 PEX26Q7Z412 305 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 ADAT2Q7Z6V5 191 aaKnown RBP12.53□□□□□ -0.4
C11orf54-214ENST00000540113 INTS2Q9H0H0 1204 aaKnown RBP12.53□□□□□ -0.4
C11orf54-214ENST00000540113 KCNH7Q9NS40 1196 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 NENFQ9UMX5 172 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 FRMD4BQ9Y2L6 1034 aa12.53□□□□□ -0.4
C11orf54-214ENST00000540113 WDR46O15213 610 aaKnown RBP12.52□□□□□ -0.4
C11orf54-214ENST00000540113 DHX15O43143 795 aaKnown RBP12.52□□□□□ -0.4
C11orf54-214ENST00000540113 HSF2BPO75031 334 aa12.52□□□□□ -0.4
C11orf54-214ENST00000540113 ALAS1P13196 640 aa12.52□□□□□ -0.4
C11orf54-214ENST00000540113 PHLDB3Q6NSJ2 640 aa12.52□□□□□ -0.4
C11orf54-214ENST00000540113 EMBQ6PCB8 327 aa12.52□□□□□ -0.4
C11orf54-214ENST00000540113 HS2ST1Q7LGA3 356 aa12.52□□□□□ -0.4
C11orf54-214ENST00000540113 MIER3Q7Z3K6 550 aa12.52□□□□□ -0.4
C11orf54-214ENST00000540113 PRPF38AQ8NAV1 312 aaKnown RBP12.52□□□□□ -0.4
C11orf54-214ENST00000540113 ARHGEF26Q96DR7 871 aa12.52□□□□□ -0.4
C11orf54-214ENST00000540113 RAVER2Q9HCJ3 691 aaKnown RBP12.52□□□□□ -0.4
C11orf54-214ENST00000540113 GPRC5CQ9NQ84 441 aa12.52□□□□□ -0.4
C11orf54-214ENST00000540113 PPP1R12BO60237 982 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-214ENST00000540113 FERP16591 822 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 MUTP22033 750 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 COPB2P35606 906 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 ATP1A2P50993 1020 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 ERVK-9P63128 1117 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 IRX5P78411 483 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-214ENST00000540113 MYL7Q01449 175 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 GHRHRQ02643 423 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 SPP2Q13103 211 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 ITGB3BPQ13352 177 aaPredicted RBP12.52□□□□□ -0.41
C11orf54-214ENST00000540113 HLTFQ14527 1009 aaKnown RBP eCLIP12.52□□□□□ -0.41
C11orf54-214ENST00000540113 GLE1Q53GS7 698 aaKnown RBP12.52□□□□□ -0.41
C11orf54-214ENST00000540113 SLC20A1Q8WUM9 679 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 CAVIN3Q969G5 261 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 RUFY1Q96T51 708 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 RIT2Q99578 217 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 CBWD1Q9BRT8 395 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 KIAA1683Q9H0B3 1180 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 TAOK3Q9H2K8 898 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 RNF14Q9UBS8 474 aa12.52□□□□□ -0.41
C11orf54-214ENST00000540113 NOC2LQ9Y3T9 749 aaKnown RBP12.52□□□□□ -0.41
C11orf54-214ENST00000540113 GOLGA8IPA6NC78 632 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 GOLGA8JA6NMD2 632 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 BTNL10A8MVZ5 291 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 FOXN3O00409 490 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-214ENST00000540113 ZBTB48P10074 688 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-214ENST00000540113 EIF2AK2P19525 551 aaKnown RBP12.51□□□□□ -0.41
C11orf54-214ENST00000540113 MRPS9P82933 396 aaKnown RBP12.51□□□□□ -0.41
C11orf54-214ENST00000540113 C10orf76Q5T2E6 689 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 VPS36Q86VN1 386 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 SLC30A5Q8TAD4 765 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 SLC35G2Q8TBE7 412 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 PIK3R5Q8WYR1 880 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 CELF4Q9BZC1 486 aaKnown RBP12.51□□□□□ -0.41
C11orf54-214ENST00000540113 NEUROG2Q9H2A3 272 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 SLC38A10Q9HBR0 1119 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 DMAC2Q9NW81 257 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 PPP1R9AQ9ULJ8 1098 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 ZHX2Q9Y6X8 837 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 DOCK1Q14185 1865 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 ZNF233A6NK53 670 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 BUB1BO60566 1050 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-214ENST00000540113 BCRP11274 1271 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 GCLMP48507 274 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 PAK2Q13177 524 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 NFIL3Q16649 462 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 UGCGQ16739 394 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 TKFCQ3LXA3 575 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 ARHGEF19Q8IW93 802 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 SYTL5Q8TDW5 730 aaPredicted RBP12.51□□□□□ -0.41
C11orf54-214ENST00000540113 LPAR1Q92633 364 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 KAT5Q92993 513 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 SH3GL2Q99962 352 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 STK33Q9BYT3 514 aa12.51□□□□□ -0.41
C11orf54-214ENST00000540113 THAP2Q9H0W7 228 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms