RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 FAM217BQ9NTX9 383 aaPredicted RBP15.83■□□□□ 0.12
SMARCA4-206ENST00000538456 DCHS1Q96JQ0 3298 aa15.83■□□□□ 0.12
SMARCA4-206ENST00000538456 WDR64B1ANS9 1081 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 CHMP2AO43633 222 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 EOMESO95936 686 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 NBL1P41271 181 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 IRX6P78412 446 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 UGCGQ16739 394 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 PFKFB3Q16875 520 aaPredicted RBP15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 ATAT1Q5SQI0 421 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 RNF20Q5VTR2 975 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 KIAA1841Q6NSI8 718 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 FRMD5Q7Z6J6 570 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 FLCNQ8NFG4 579 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 ZBP1Q9H171 429 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 DZANK1Q9NVP4 752 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 DACT1Q9NYF0 836 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 C2orf16Q68DN1 1984 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 GVINP1Q7Z2Y8 2422 aa15.82■□□□□ 0.12
SMARCA4-206ENST00000538456 SPDYE4A6NLX3 237 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 EXOSC10Q01780 885 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 TBC1D8BQ0IIM8 1120 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 DRP2Q13474 957 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 ADCK5Q3MIX3 580 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 TMC5Q6UXY8 1006 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 WDR87Q6ZQQ6 2873 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 DHX32Q7L7V1 743 aaKnown RBP15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 ZDHHC14Q8IZN3 488 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 LPPQ93052 612 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 C6orf50Q9HD87 102 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 DISC1Q9NRI5 854 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 NRBP2Q9NSY0 501 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 INPP5FQ9Y2H2 1132 aa15.81■□□□□ 0.12
SMARCA4-206ENST00000538456 ADD1P35611 737 aaKnown RBP15.8■□□□□ 0.12
SMARCA4-206ENST00000538456 CABP7Q86V35 215 aa15.8■□□□□ 0.12
SMARCA4-206ENST00000538456 ZNF710Q8N1W2 664 aa15.8■□□□□ 0.12
SMARCA4-206ENST00000538456 BCL7CQ8WUZ0 217 aaPredicted RBP15.8■□□□□ 0.12
SMARCA4-206ENST00000538456 LENG9Q96B70 501 aa15.8■□□□□ 0.12
SMARCA4-206ENST00000538456 ZMYND12Q9H0C1 365 aa15.8■□□□□ 0.12
SMARCA4-206ENST00000538456 GBP3Q9H0R5 595 aa15.8■□□□□ 0.12
SMARCA4-206ENST00000538456 ESYT2A0FGR8 921 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 TMEM150BA6NC51 233 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 CTSAP10619 480 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 PHKA2P46019 1235 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 FGD1P98174 961 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 FOXK2Q01167 660 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 RNASELQ05823 741 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 CWF19L1Q69YN2 538 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 MCTP2Q6DN12 878 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 TWF2Q6IBS0 349 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 DDX53Q86TM3 631 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 PLCD3Q8N3E9 789 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 CCDC12Q8WUD4 166 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 SLC22A17Q8WUG5 538 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 NKD2Q969F2 451 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 GJA10Q969M2 543 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 IGSF21Q96ID5 467 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 SH2D3AQ9BRG2 576 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 GCOM2Q9BZD3 368 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 CYP26B1Q9NR63 512 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 TBC1D13Q9NVG8 400 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 SEPT9Q9UHD8 586 aaPredicted RBP15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 PIN4Q9Y237 131 aaKnown RBP15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 USTQ9Y2C2 406 aa15.79■□□□□ 0.12
SMARCA4-206ENST00000538456 A0A087WZ62 844 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 MEIS3P2A8K0S8 358 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 MSH4O15457 936 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 GAS7O60861 476 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 SSBP05455 408 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 SFPQP23246 707 aaKnown RBP eCLIP15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 CLCN5P51795 746 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 POLGP54098 1239 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 MTERF2Q49AM1 385 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 GLB1LQ6UWU2 654 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 CCDC149Q6ZUS6 474 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 RASEFQ8IZ41 740 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 CCDC136Q96JN2 1154 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 FDXACB1Q9BRP7 624 aaPredicted RBP15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 UNC45AQ9H3U1 944 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 NRDE2Q9H7Z3 1164 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 SFXN1Q9H9B4 322 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 DNAJB4Q9UDY4 337 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 IRAK3Q9Y616 596 aa15.78■□□□□ 0.12
SMARCA4-206ENST00000538456 CPA1P15085 419 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 GNA11P29992 359 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 CIITAP33076 1130 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 JAK3P52333 1124 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 RCAN1P53805 252 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 GIT2Q14161 759 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 PTPN14Q15678 1187 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 NOMO2Q5JPE7 1267 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 LRCH2Q5VUJ6 765 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 ADSSL1Q8N142 457 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 PHKBQ93100 1093 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 ACSF2Q96CM8 615 aaPredicted RBP15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 VN1R3Q9BXE9 311 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 TEKT3Q9BXF9 490 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 CHST12Q9NRB3 414 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 FBXL21Q9UKT6 434 aa15.77■□□□□ 0.12
SMARCA4-206ENST00000538456 CCDC196A0A1B0GTZ2 297 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms