RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 ZNF274Q96GC6 653 aaPredicted RBP9.44□□□□□ -0.9
RPUSD4-209ENST00000534393 TRAIPQ9BWF2 469 aa9.44□□□□□ -0.9
RPUSD4-209ENST00000534393 TM6SF1Q9BZW5 370 aa9.44□□□□□ -0.9
RPUSD4-209ENST00000534393 UNC45AQ9H3U1 944 aa9.44□□□□□ -0.9
RPUSD4-209ENST00000534393 ZSWIM6Q9HCJ5 1215 aa9.44□□□□□ -0.9
RPUSD4-209ENST00000534393 SEPT9Q9UHD8 586 aaPredicted RBP9.44□□□□□ -0.9
RPUSD4-209ENST00000534393 CACNA1HO95180 2353 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 TMEM221A6NGB7 291 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 M0R296 226 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 CDKL5O76039 1030 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 XBP1P17861 261 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 ANP32AP39687 249 aaKnown RBP9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 TECP42680 631 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 RAB27AP51159 221 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 ZXDAP98168 799 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 KCNC3Q14003 757 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 GIT2Q14161 759 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 SMC1AQ14683 1233 aaKnown RBP9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 PLPP4Q5VZY2 271 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 CES5AQ6NT32 575 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 ANKRD54Q6NXT1 300 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 LRRC55Q6ZSA7 311 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 ZNF598Q86UK7 904 aaKnown RBP9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 ZNF410Q86VK4 478 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 SUGP1Q8IWZ8 645 aaKnown RBP9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 BLIDQ8IZY5 108 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 MRPL43Q8N983 215 aaKnown RBP9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 TMEM87AQ8NBN3 555 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 DAGLBQ8NCG7 672 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 RNF169Q8NCN4 708 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 PBXIP1Q96AQ6 731 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 TMEM169Q96HH4 297 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 RPGRIP1Q96KN7 1286 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 FBXL18Q96ME1 805 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 NECTIN4Q96NY8 510 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 NAP1L4Q99733 375 aaKnown RBP9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 NCOA5Q9HCD5 579 aaKnown RBP9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 STK39Q9UEW8 545 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 NR2E1Q9Y466 385 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 PPME1Q9Y570 386 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 PCDHGC5Q9Y5F6 944 aa9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 TDRD15B5MCY1 1934 aaKnown RBP9.43□□□□□ -0.9
RPUSD4-209ENST00000534393 IGKV6-21A0A0C4DH24 114 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 EDIL3O43854 480 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 MAFO75444 373 aaPredicted RBP9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 GCFC2P16383 781 aaKnown RBP9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 PHKA2P46019 1235 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 POLGP54098 1239 aaPredicted RBP9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 PSMC5P62195 406 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 NHLH1Q02575 133 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 ITIH3Q06033 890 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 SIGLEC14Q08ET2 396 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 NONOQ15233 471 aaKnown RBP eCLIP9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 UGCGQ16739 394 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 MTERF2Q49AM1 385 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 CLLU1OSQ5K130 101 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 TWF2Q6IBS0 349 aaKnown RBP9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 GLB1LQ6UWU2 654 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 B3GNT9Q6UX72 402 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 KRT25Q7Z3Z0 450 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 ALYREFQ86V81 257 aaKnown RBP9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 SLC39A11Q8N1S5 342 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 VN1R2Q8NFZ6 395 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 PGBD4Q96DM1 585 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 FAM20AQ96MK3 541 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 MBOAT7Q96N66 472 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 IRF2BPLQ9H1B7 796 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 S1PR5Q9H228 398 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 RNF19AQ9NV58 838 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 SUCLA2Q9P2R7 463 aaPredicted RBP9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 HCSTQ9UBK5 93 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 DDX25Q9UHL0 483 aaKnown RBP9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 KMT2EQ8IZD2 1858 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 ARID2Q68CP9 1835 aa9.42□□□□□ -0.9
RPUSD4-209ENST00000534393 MTCL1Q9Y4B5 1905 aaKnown RBP9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 A0A087WZ62 844 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 CCDC194A0A1B0GVG4 234 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 C2orf71A6NGG8 1288 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 HIDE1A8MVS5 230 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 M0R2N6 131 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 GAS2O43903 313 aaKnown RBP9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 ZNF623O75123 536 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 TDP2O95551 362 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 CXCL14O95715 111 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 MTHFRP42898 656 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 QARSP47897 775 aaKnown RBP9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 MRE11P49959 708 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 PTPN5P54829 565 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 BCAR1P56945 870 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 RNASELQ05823 741 aaKnown RBP9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 TOB2Q14106 344 aaPredicted RBP9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 PTPN21Q16825 1174 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 PPP4R3AQ6IN85 833 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 SYCE2Q6PIF2 218 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 RHPN2Q8IUC4 686 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 FBXL6Q8N531 539 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 ETNPPLQ8TBG4 499 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 HELQQ8TDG4 1101 aa9.41□□□□□ -0.9
RPUSD4-209ENST00000534393 SLC7A3Q8WY07 619 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 220.8 ms