RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 ALDH7A1P49419 539 aaKnown RBP23.78■■□□□ 1.4
CHKA-206ENST00000531341 PRKCEQ02156 737 aa23.78■■□□□ 1.4
CHKA-206ENST00000531341 ZDHHC14Q8IZN3 488 aa23.78■■□□□ 1.4
CHKA-206ENST00000531341 SLC22A17Q8WUG5 538 aa23.78■■□□□ 1.4
CHKA-206ENST00000531341 NLRP7Q8WX94 980 aa23.78■■□□□ 1.4
CHKA-206ENST00000531341 FAM167AQ96KS9 214 aa23.78■■□□□ 1.4
CHKA-206ENST00000531341 TCEAL9Q9UHQ7 104 aa23.78■■□□□ 1.4
CHKA-206ENST00000531341 NAP1L2Q9ULW6 460 aaPredicted RBP23.78■■□□□ 1.4
CHKA-206ENST00000531341 ESYT2A0FGR8 921 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 TMEM150BA6NC51 233 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 PRR23AA6NEV1 266 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 WDR64B1ANS9 1081 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 MSH4O15457 936 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 ZC3H11AO75152 810 aaKnown RBP eCLIP23.77■■□□□ 1.4
CHKA-206ENST00000531341 NBL1P41271 181 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 ASTLQ6HA08 431 aaPredicted RBP23.77■■□□□ 1.4
CHKA-206ENST00000531341 KIAA1841Q6NSI8 718 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 SKAP1Q86WV1 359 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 REXO1Q8N1G1 1221 aaKnown RBP23.77■■□□□ 1.4
CHKA-206ENST00000531341 TMEM169Q96HH4 297 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 SCLT1Q96NL6 688 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 SH2D3AQ9BRG2 576 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 C6orf50Q9HD87 102 aa23.77■■□□□ 1.4
CHKA-206ENST00000531341 DBR1Q9UK59 544 aaKnown RBP23.77■■□□□ 1.4
CHKA-206ENST00000531341 MYH9P35579 1960 aaKnown RBP23.77■■□□□ 1.4
CHKA-206ENST00000531341 CHMP2AO43633 222 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 PHKA2P46019 1235 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 TARBP2Q15633 366 aaKnown RBP23.76■■□□□ 1.39
CHKA-206ENST00000531341 TSGA10IPQ3SY00 556 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 RNF20Q5VTR2 975 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 TMC5Q6UXY8 1006 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 TDRD5Q8NAT2 981 aaKnown RBP23.76■■□□□ 1.39
CHKA-206ENST00000531341 CEP89Q96ST8 783 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 VN1R3Q9BXE9 311 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 MRPL9Q9BYD2 267 aaKnown RBP23.76■■□□□ 1.39
CHKA-206ENST00000531341 UNC45AQ9H3U1 944 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 NRDE2Q9H7Z3 1164 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 FRYLO94915 3013 aa23.76■■□□□ 1.39
CHKA-206ENST00000531341 B4GALT3O60512 393 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 GALTP07902 379 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 CTSAP10619 480 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 ATAT1Q5SQI0 421 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 FRMD5Q7Z6J6 570 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 PHKBQ93100 1093 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 IGSF21Q96ID5 467 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 DNAJB4Q9UDY4 337 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 IRAK3Q9Y616 596 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 SPTBN4Q9H254 2564 aa23.75■■□□□ 1.39
CHKA-206ENST00000531341 A0A087WZ62 844 aa23.74■■□□□ 1.39
CHKA-206ENST00000531341 PI15O43692 258 aa23.74■■□□□ 1.39
CHKA-206ENST00000531341 STBD1O95210 358 aa23.74■■□□□ 1.39
CHKA-206ENST00000531341 TBC1D8BQ0IIM8 1120 aa23.74■■□□□ 1.39
CHKA-206ENST00000531341 CWF19L1Q69YN2 538 aaKnown RBP23.74■■□□□ 1.39
CHKA-206ENST00000531341 DDX53Q86TM3 631 aaKnown RBP23.74■■□□□ 1.39
CHKA-206ENST00000531341 ZNF710Q8N1W2 664 aa23.74■■□□□ 1.39
CHKA-206ENST00000531341 FDXACB1Q9BRP7 624 aaPredicted RBP23.74■■□□□ 1.39
CHKA-206ENST00000531341 TBC1D13Q9NVG8 400 aa23.74■■□□□ 1.39
CHKA-206ENST00000531341 DACT1Q9NYF0 836 aa23.74■■□□□ 1.39
CHKA-206ENST00000531341 NPR3P17342 541 aa23.73■■□□□ 1.39
CHKA-206ENST00000531341 MTERF2Q49AM1 385 aa23.73■■□□□ 1.39
CHKA-206ENST00000531341 MCTP2Q6DN12 878 aa23.73■■□□□ 1.39
CHKA-206ENST00000531341 CCDC136Q96JN2 1154 aa23.73■■□□□ 1.39
CHKA-206ENST00000531341 GCOM2Q9BZD3 368 aaPredicted RBP23.73■■□□□ 1.39
CHKA-206ENST00000531341 MFSD1Q9H3U5 465 aa23.73■■□□□ 1.39
CHKA-206ENST00000531341 DZANK1Q9NVP4 752 aa23.73■■□□□ 1.39
CHKA-206ENST00000531341 USTQ9Y2C2 406 aa23.73■■□□□ 1.39
CHKA-206ENST00000531341 PRPF3O43395 683 aaKnown RBP23.72■■□□□ 1.39
CHKA-206ENST00000531341 OFD1O75665 1012 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 SLC11A1P49279 550 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 CLCN5P51795 746 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 AFF1P51825 1210 aaKnown RBP23.72■■□□□ 1.39
CHKA-206ENST00000531341 RCAN1P53805 252 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 ZNF280BQ86YH2 543 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 KSR1Q8IVT5 923 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 PLCD3Q8N3E9 789 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 FLCNQ8NFG4 579 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 SLC5A5Q92911 643 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 TRAIPQ9BWF2 469 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 GBP3Q9H0R5 595 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 CHST12Q9NRB3 414 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 INPP5FQ9Y2H2 1132 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 DMXL1Q9Y485 3027 aa23.72■■□□□ 1.39
CHKA-206ENST00000531341 WDR81Q562E7 1941 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 IGKV6-21A0A0C4DH24 114 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 GAS7O60861 476 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 GNA11P29992 359 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 POLGP54098 1239 aaPredicted RBP23.71■■□□□ 1.39
CHKA-206ENST00000531341 PTPN14Q15678 1187 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 TWF2Q6IBS0 349 aaKnown RBP23.71■■□□□ 1.39
CHKA-206ENST00000531341 Q6ZUG5 572 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 CABP7Q86V35 215 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 TMEM87AQ8NBN3 555 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 CCDC12Q8WUD4 166 aaPredicted RBP23.71■■□□□ 1.39
CHKA-206ENST00000531341 RIT2Q99578 217 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 NIFKQ9BYG3 293 aaKnown RBP23.71■■□□□ 1.39
CHKA-206ENST00000531341 CYP26B1Q9NR63 512 aa23.71■■□□□ 1.39
CHKA-206ENST00000531341 SEPT9Q9UHD8 586 aaPredicted RBP23.71■■□□□ 1.39
CHKA-206ENST00000531341 PTPRZ1P23471 2315 aaPredicted RBP23.71■■□□□ 1.39
CHKA-206ENST00000531341 BMS1Q14692 1282 aaKnown RBP23.7■■□□□ 1.38
CHKA-206ENST00000531341 NOMO2Q5JPE7 1267 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms