RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 EYA4O95677 639 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 PSAPP07602 524 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 FGFR1P11362 822 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 CD46P15529 392 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 CLCN3P51790 818 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 CRYBB1P53674 252 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-209ENST00000530620 RBM10P98175 930 aaKnown RBP12.06□□□□□ -0.48
C11orf54-209ENST00000530620 PRR16Q569H4 304 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 ODR4Q5SWX8 454 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 SMAP1Q8IYB5 467 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-209ENST00000530620 METTL13Q8N6R0 699 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 COLGALT1Q8NBJ5 622 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 CCDC12Q8WUD4 166 aaPredicted RBP12.06□□□□□ -0.48
C11orf54-209ENST00000530620 KCNB2Q92953 911 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 UPF3BQ9BZI7 483 aaKnown RBP12.06□□□□□ -0.48
C11orf54-209ENST00000530620 TBC1D22BQ9NU19 505 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 GABBR1Q9UBS5 961 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 TCEAL9Q9UHQ7 104 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 PCDHB12Q9Y5F1 795 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 SNX14Q9Y5W7 946 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 WDFY4Q6ZS81 3184 aa12.06□□□□□ -0.48
C11orf54-209ENST00000530620 PER2O15055 1255 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 EDIL3O43854 480 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 ZNF862O60290 1169 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 FGF18O76093 207 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 CIITAP33076 1130 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 HSPA4P34932 840 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 ERVFC1P60507 584 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 COASYQ13057 564 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 DSC3Q14574 896 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 NTRK3Q16288 839 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 UGCGQ16739 394 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 HERC4Q5GLZ8 1057 aaPredicted RBP12.05□□□□□ -0.48
C11orf54-209ENST00000530620 MCTP2Q6DN12 878 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 BLOC1S2Q6QNY1 142 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 HFE2Q6ZVN8 426 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 RNF135Q8IUD6 432 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 PARP9Q8IXQ6 854 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 LINC01465Q8N7H1 131 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 VN1R2Q8NFZ6 395 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 CWH43Q9H720 699 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 TLR9Q9NR96 1032 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 AAASQ9NRG9 546 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 TYW1Q9NV66 732 aaKnown RBP12.05□□□□□ -0.48
C11orf54-209ENST00000530620 TMEM161AQ9NX61 479 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 VPS54Q9P1Q0 977 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 USP15Q9Y4E8 981 aaPredicted RBP12.05□□□□□ -0.48
C11orf54-209ENST00000530620 SAMM50Q9Y512 469 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 PCDHA10Q9Y5I2 948 aa12.05□□□□□ -0.48
C11orf54-209ENST00000530620 DENND4AQ7Z401 1863 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 MSH4O15457 936 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 GNA11P29992 359 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 GCGRP47871 477 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 PRKCEQ02156 737 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 UBE3AQ05086 875 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 FAM43BQ6ZT52 329 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-209ENST00000530620 THNSL1Q8IYQ7 743 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 LRRC71Q8N4P6 559 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 CCDC148Q8NFR7 591 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 MICAL1Q8TDZ2 1067 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 ZNF668Q96K58 619 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-209ENST00000530620 FAM167AQ96KS9 214 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 MAP7D2Q96T17 732 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 MTRQ99707 1265 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 SLC26A6Q9BXS9 759 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 RNF26Q9BY78 433 aaPredicted RBP12.04□□□□□ -0.48
C11orf54-209ENST00000530620 AGXT2Q9BYV1 514 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 ADAMTS10Q9H324 1103 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 TLE6Q9H808 572 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 ATP6V0A4Q9HBG4 840 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 NCOA5Q9HCD5 579 aaKnown RBP12.04□□□□□ -0.48
C11orf54-209ENST00000530620 RNF19AQ9NV58 838 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 CEP131Q9UPN4 1083 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 AKT3Q9Y243 479 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 PCDHB3Q9Y5E6 796 aa12.04□□□□□ -0.48
C11orf54-209ENST00000530620 WDR64B1ANS9 1081 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 FSCN2O14926 492 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 MAGEB2O15479 319 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 CHMP2AO43633 222 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 LAG3P18627 525 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 RPS6KB1P23443 525 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 PBX3P40426 434 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 NLRP11P59045 1033 aaKnown RBP12.03□□□□□ -0.48
C11orf54-209ENST00000530620 FAM189BP81408 668 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 AKAP17AQ02040 695 aaKnown RBP12.03□□□□□ -0.48
C11orf54-209ENST00000530620 DUSP6Q16828 381 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 PLPP4Q5VZY2 271 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 EFCAB12Q6NXP0 572 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 LRRC55Q6ZSA7 311 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 BICD2Q8TD16 824 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 GJA10Q969M2 543 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 TMEM117Q9H0C3 514 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 ELAC1Q9H777 363 aaKnown RBP12.03□□□□□ -0.48
C11orf54-209ENST00000530620 DISC1Q9NRI5 854 aa12.03□□□□□ -0.48
C11orf54-209ENST00000530620 C2orf16Q68DN1 1984 aa12.02□□□□□ -0.49
C11orf54-209ENST00000530620 LOC730098B7Z3J9 87 aa12.02□□□□□ -0.49
C11orf54-209ENST00000530620 GAS7O60861 476 aa12.02□□□□□ -0.49
C11orf54-209ENST00000530620 IFNAR1P17181 557 aa12.02□□□□□ -0.49
C11orf54-209ENST00000530620 NHLH1Q02575 133 aa12.02□□□□□ -0.49
C11orf54-209ENST00000530620 ECHDC2Q86YB7 292 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms