RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 CDR2LQ86X02 465 aaPredicted RBP16.53■□□□□ 0.24
USP35-203ENST00000529308 NUDT12Q9BQG2 462 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 PPP1R12CQ9BZL4 782 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 KLHL14Q9P2G3 628 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 SNX12Q9UMY4 172 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 MYO5BQ9ULV0 1848 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 MED24O75448 989 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 MTM1Q13496 603 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 TMED2Q15363 201 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 ERICH1Q86X53 443 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 ZFPM1Q8IX07 1006 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 RHOT2Q8IXI1 618 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 VPS52Q8N1B4 723 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 SSX2IPQ9Y2D8 614 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 RRP15Q9Y3B9 282 aaKnown RBP16.53■□□□□ 0.24
USP35-203ENST00000529308 PDS5AQ29RF7 1337 aaKnown RBP16.53■□□□□ 0.24
USP35-203ENST00000529308 EVI5O60447 810 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 DPEP1P16444 411 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 SPC25Q9HBM1 224 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
USP35-203ENST00000529308 RASGRF2O14827 1237 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 GALCP54803 685 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 EZH2Q15910 746 aaKnown RBP16.53■□□□□ 0.24
USP35-203ENST00000529308 KRT39Q6A163 491 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 ZNF710Q8N1W2 664 aa16.53■□□□□ 0.24
USP35-203ENST00000529308 POLR3FQ9H1D9 316 aaPredicted RBP16.53■□□□□ 0.24
USP35-203ENST00000529308 NR3C2P08235 984 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 ORC2Q13416 577 aaPredicted RBP16.52■□□□□ 0.24
USP35-203ENST00000529308 R3HDM1Q15032 1099 aaKnown RBP16.52■□□□□ 0.24
USP35-203ENST00000529308 LGSNQ5TDP6 509 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 ANGEL2Q5VTE6 544 aaKnown RBP16.52■□□□□ 0.24
USP35-203ENST00000529308 SH2D3CQ8N5H7 860 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 NUP85Q9BW27 656 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 RPF1Q9H9Y2 349 aaKnown RBP16.52■□□□□ 0.24
USP35-203ENST00000529308 RPA1P27694 616 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 CASP4P49662 377 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 PSMD6Q15008 389 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 SLC18A3Q16572 532 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 ZNF568Q3ZCX4 644 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 RSBN1LQ6PCB5 846 aaPredicted RBP16.52■□□□□ 0.24
USP35-203ENST00000529308 CEP128Q6ZU80 1094 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 PLCD3Q8N3E9 789 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 RNF10Q8N5U6 811 aaKnown RBP16.52■□□□□ 0.24
USP35-203ENST00000529308 COG1Q8WTW3 980 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 C1orf54Q8WWF1 131 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 STMN2Q93045 179 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 GPRC5CQ9NQ84 441 aa16.52■□□□□ 0.24
USP35-203ENST00000529308 SALL1Q9NSC2 1324 aa16.52■□□□□ 0.23
USP35-203ENST00000529308 NEURL4Q96JN8 1562 aa16.52■□□□□ 0.23
USP35-203ENST00000529308 MSH4O15457 936 aa16.52■□□□□ 0.23
USP35-203ENST00000529308 CYP11B2P19099 503 aa16.52■□□□□ 0.23
USP35-203ENST00000529308 RPS6P62753 249 aaKnown RBP16.52■□□□□ 0.23
USP35-203ENST00000529308 APBA1Q02410 837 aa16.52■□□□□ 0.23
USP35-203ENST00000529308 ZKSCAN4Q969J2 545 aaPredicted RBP16.52■□□□□ 0.23
USP35-203ENST00000529308 ATG4CQ96DT6 458 aa16.52■□□□□ 0.23
USP35-203ENST00000529308 DEFB129Q9H1M3 183 aa16.52■□□□□ 0.23
USP35-203ENST00000529308 KCNH7Q9NS40 1196 aa16.52■□□□□ 0.23
USP35-203ENST00000529308 RNF181Q9P0P0 153 aa16.52■□□□□ 0.23
USP35-203ENST00000529308 KCTD6Q8NC69 237 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 ZNF564Q8TBZ8 553 aaPredicted RBP16.51■□□□□ 0.23
USP35-203ENST00000529308 FAM151AQ8WW52 585 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 HSPH1Q92598 858 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 ZNF302Q9NR11 478 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 A6NJR5 290 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 ATMINO43313 823 aaPredicted RBP16.51■□□□□ 0.23
USP35-203ENST00000529308 ZNF667Q5HYK9 610 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 CATSPER4Q7RTX7 472 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 SDCCAG8Q86SQ7 713 aaPredicted RBP16.51■□□□□ 0.23
USP35-203ENST00000529308 DDX42Q86XP3 938 aaKnown RBP eCLIP16.51■□□□□ 0.23
USP35-203ENST00000529308 P3H4Q92791 437 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 RUNDC3BQ96NL0 473 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 KBTBD4Q9NVX7 518 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 SLC5A4Q9NY91 659 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 A0A087X0T9 212 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 PABPN1LA6NDY0 278 aaKnown RBP16.51■□□□□ 0.23
USP35-203ENST00000529308 CCDC160A6NGH7 325 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 PIK3R2O00459 728 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 FAM228BP0C875 321 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 PSMC6P62333 389 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 NEDD9Q14511 834 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 CCDC125Q86Z20 511 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 LRRN4CLQ8ND94 238 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 OR6B3Q8NGW1 331 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 WHAMMQ8TF30 809 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 PSPC1Q8WXF1 523 aaKnown RBP16.51■□□□□ 0.23
USP35-203ENST00000529308 PI4K2AQ9BTU6 479 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 ACAD9Q9H845 621 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 KLHL11Q9NVR0 708 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 SEL1LQ9UBV2 794 aa16.51■□□□□ 0.23
USP35-203ENST00000529308 SART1O43290 800 aaKnown RBP16.5■□□□□ 0.23
USP35-203ENST00000529308 ENTPD3O75355 529 aa16.5■□□□□ 0.23
USP35-203ENST00000529308 SOX5P35711 763 aa16.5■□□□□ 0.23
USP35-203ENST00000529308 IRX4P78413 519 aa16.5■□□□□ 0.23
USP35-203ENST00000529308 C2CD6Q53TS8 623 aa16.5■□□□□ 0.23
USP35-203ENST00000529308 MAP7D3Q8IWC1 876 aa16.5■□□□□ 0.23
USP35-203ENST00000529308 RNF149Q8NC42 400 aa16.5■□□□□ 0.23
USP35-203ENST00000529308 TCP11Q8WWU5 503 aa16.5■□□□□ 0.23
USP35-203ENST00000529308 RPS6KC1Q96S38 1066 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms