RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 DCLK2Q8N568 766 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 KLHL5Q96PQ7 755 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 NRDE2Q9H7Z3 1164 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 WDR6Q9NNW5 1121 aaKnown RBP18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 RIC8AQ9NPQ8 531 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 GPC3P51654 580 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 RSPO4Q2I0M5 234 aaPredicted RBP18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 MIS18BP1Q6P0N0 1132 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 TMTC3Q6ZXV5 915 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 METTL13Q8N6R0 699 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 RIN2Q8WYP3 895 aaPredicted RBP18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 ANO3Q9BYT9 981 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 CHST12Q9NRB3 414 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 DACT1Q9NYF0 836 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 STK39Q9UEW8 545 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 CEP131Q9UPN4 1083 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 DOCK8Q8NF50 2099 aa18.44■□□□□ 0.54
CHMP4A-203ENST00000527154 FAM86B1E9PN63 330 aa18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 CFHP08603 1231 aa18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 CNPP09543 421 aaKnown RBP18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 FAM86B2P0C5J1 330 aa18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 GLULP15104 373 aa18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 ZNF746Q6NUN9 644 aaPredicted RBP18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 TMTC2Q8N394 836 aa18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 RSAD2Q8WXG1 361 aa18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 SLC2A4RGQ9NR83 387 aa18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 TBC1D13Q9NVG8 400 aa18.43■□□□□ 0.54
CHMP4A-203ENST00000527154 hCG_1642624A0A1W2PR95 340 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 SH2B2O14492 632 aaPredicted RBP18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 B4GALT3O60512 393 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 ZC3H11AO75152 810 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 LIFRP42702 1097 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 PHKA2P46019 1235 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 AP3B2Q13367 1082 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 NONOQ15233 471 aaKnown RBP eCLIP18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 ZNF528Q3MIS6 628 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 WWC2Q6AWC2 1192 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 EFCAB12Q6NXP0 572 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 PPP1R18Q6NYC8 613 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 MAP7D2Q96T17 732 aa18.42■□□□□ 0.54
CHMP4A-203ENST00000527154 MAP1BP46821 2468 aaKnown RBP18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 CHD6Q8TD26 2715 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 POTEMA6NI47 508 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 ANHXE9PGG2 379 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 IPO5O00410 1097 aaKnown RBP18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 ZNF623O75123 536 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 EFEMP2O95967 443 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 CYP3A4P08684 503 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 CALM1P0DP23 149 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 CALM2P0DP24 149 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 CALM3P0DP25 149 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 SDHBP21912 280 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 SLC11A1P49279 550 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 COL9A3Q14050 684 aaPredicted RBP18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 POTEGQ6S5H5 508 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 SMAP1Q8IYB5 467 aaPredicted RBP18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 RNF168Q8IYW5 571 aaPredicted RBP18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 RNF169Q8NCN4 708 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 PGBD1Q96JS3 809 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 EMILIN2Q9BXX0 1053 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 ARHGEF3Q9NR81 526 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 AKT3Q9Y243 479 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 SIT1Q9Y3P8 196 aa18.41■□□□□ 0.54
CHMP4A-203ENST00000527154 DDX39AO00148 427 aaKnown RBP18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 OFD1O75665 1012 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 C1RP00736 705 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 DCNP07585 359 aaKnown RBP18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 TMOD1P28289 359 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 CA8P35219 290 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 ATXN1P54253 815 aaKnown RBP18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 STARD6P59095 220 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 FUT2Q10981 343 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 AAMPQ13685 434 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 HEATR3Q7Z4Q2 680 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 TMEM87AQ8NBN3 555 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 PJA1Q8NG27 643 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 GPR152Q8TDT2 470 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 NELL1Q92832 810 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 MAP4K1Q92918 833 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 TMEM87BQ96K49 555 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 FAM167AQ96KS9 214 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 MYADMQ96S97 322 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 DDX23Q9BUQ8 820 aaKnown RBP18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 TBC1D22BQ9NU19 505 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 DNAJB4Q9UDY4 337 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 PCDHA10Q9Y5I2 948 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 CLUHO75153 1309 aa18.4■□□□□ 0.54
CHMP4A-203ENST00000527154 USP24Q9UPU5 2620 aa18.39■□□□□ 0.54
CHMP4A-203ENST00000527154 SPTLC1O15269 473 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 ZNF862O60290 1169 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 RXRAP19793 462 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 TGM1P22735 817 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 NOMO2Q5JPE7 1267 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 DIEXFQ68CQ4 756 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 B4GALNT3Q6L9W6 998 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 PLA2G4DQ86XP0 818 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 LRRC71Q8N4P6 559 aa18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 GPR161Q8N6U8 529 aaKnown RBP18.39■□□□□ 0.53
CHMP4A-203ENST00000527154 FANCBQ8NB91 859 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms