RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RAB27AP51159 221 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 EFNA5P52803 228 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 RABGGTBP53611 331 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 POU5F1BQ06416 359 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 DMP1Q13316 513 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 MKRN4PQ13434 485 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 GPNMBQ14956 572 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 PTPAQ15257 358 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 IL17AQ16552 155 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 HYIQ5T013 277 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 RRAGBQ5VZM2 374 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 TWF2Q6IBS0 349 aaKnown RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CCDC73Q6ZRK6 1079 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 SLC24A5Q71RS6 500 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 FAM228AQ86W67 206 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 KSR1Q8IVT5 923 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 DEFB123Q8N688 67 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 RNF169Q8NCN4 708 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 LINC00301Q8NCQ3 95 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 TMEM40Q8WWA1 233 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 RSPH1Q8WYR4 309 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 SYMPKQ92797 1274 aaKnown RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 VWCEQ96DN2 955 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CCDC51Q96ER9 411 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CEP89Q96ST8 783 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 PLIN2Q99541 437 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 PYM1Q9BRP8 204 aaKnown RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 PBX4Q9BYU1 374 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 TRIM6Q9C030 488 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CCSER1Q9C0I3 900 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CSRNP2Q9H175 543 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 TSPYL2Q9H2G4 693 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 NKX2-4Q9H2Z4 354 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 C17orf75Q9HAS0 396 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CDHR5Q9HBB8 845 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 CHST12Q9NRB3 414 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 FAM13BQ9NYF5 915 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 TFIP11Q9UBB9 837 aaKnown RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 STK17AQ9UEE5 414 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 FBXO2Q9UK22 296 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 RWDD3Q9Y3V2 267 aa5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 MKI67P46013 3256 aaKnown RBP5.98□□□□□ -1.45
HMGB1P40-201ENST00000525121 A0A087WWV3 80 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 GOLGA6L4A6NEF3 574 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 CCDC169A6NNP5 214 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ENPP3O14638 875 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 TNRC18O15417 2968 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 HIP1RO75146 1068 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 FAM13AO94988 1023 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 BRD1O95696 1058 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 LIG1P18858 919 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 SCP2P22307 547 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 FGFR4P22455 802 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 GLRA2P23416 452 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 GUCY2CP25092 1073 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 AXLP30530 894 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ABCD1P33897 745 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ARL2P36404 184 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 PBX2P40425 430 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 SMTNP53814 917 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 PTENP60484 403 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 DNM1Q05193 864 aaKnown RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 STRN3Q13033 797 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 GRB10Q13322 594 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 PKP1Q13835 747 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 CAPSQ13938 189 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 BTG3Q14201 252 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 DHX8Q14562 1220 aaKnown RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 KARSQ15046 597 aaKnown RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ECM1Q16610 540 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 MAPK6Q16659 721 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 CSPP1Q1MSJ5 1256 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 TCTN1Q2MV58 587 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 TMEM119Q4V9L6 283 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 SPOUT1Q5T280 376 aaKnown RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 NOTUMQ6P988 496 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 GPBP1Q86WP2 473 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 FIBCD1Q8N539 461 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 SYT2Q8N9I0 419 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 CNNM3Q8NE01 707 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ASAP3Q8TDY4 903 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 LARP4BQ92615 738 aaKnown RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 RAD54LQ92698 747 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 TOP1MTQ969P6 601 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 PGBD4Q96DM1 585 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 CCDC34Q96HJ3 373 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 SPATA32Q96LK8 384 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 PRIMPOLQ96LW4 560 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 FAM161BQ96MY7 647 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 SAMD11Q96NU1 681 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 CLIC6Q96NY7 704 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 GAS2L1Q99501 681 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 ADPGKQ9BRR6 497 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 MMTAG2Q9BU76 263 aaKnown RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 NFKBIZQ9BYH8 718 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 LRRC27Q9C0I9 530 aa5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 SCAND2PQ9GZW5 306 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P40-201ENST00000525121 CUEDC2Q9H467 287 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms