RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 SPATA5Q8NB90 893 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 MDM1Q8TC05 714 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 SSH3Q8TE77 659 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 GLMNQ92990 594 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 OSBP2Q969R2 916 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 ATP6V1E2Q96A05 226 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 SPDL1Q96EA4 605 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 OTUD5Q96G74 571 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 SMC6Q96SB8 1091 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 STARD7Q9NQZ5 370 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 USP40Q9NVE5 1235 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 MOCS1Q9NZB8 636 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 RIMKLBQ9ULI2 386 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 HPS5Q9UPZ3 1129 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 SNX8Q9Y5X2 465 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 EPN1Q9Y6I3 576 aaPredicted RBP8.18□□□□□ -1.1
HDAC3-216ENST00000523088 PTPRFP10586 1907 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 MROH7-TTC4A0A0A0MT08 1334 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 RFX7Q2KHR2 1363 aa8.18□□□□□ -1.1
HDAC3-216ENST00000523088 ATAD5Q96QE3 1844 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 IGF2BP3O00425 579 aaKnown RBP eCLIP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ASAP2O43150 1006 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ZC3H11AO75152 810 aaKnown RBP eCLIP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 BAG3O95817 575 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 EPB41P11171 864 aaKnown RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 EZRP15311 586 aaKnown RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 STAT3P40763 770 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 HALP42357 657 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 MASP1P48740 699 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 LIMK1P53667 647 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 PRMT2P55345 433 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 DSTNP60981 165 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 TIMM10P62072 90 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 GUCY1B3Q02153 619 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 UBXN1Q04323 297 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 CRHR2Q13324 411 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 TAF1CQ15572 869 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 DIXDC1Q155Q3 683 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 GRIK5Q16478 980 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 IMMTQ16891 758 aaKnown RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 CEP85LQ5SZL2 805 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 MZT2BQ6NZ67 158 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ERAP2Q6P179 960 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 MILR1Q7Z6M3 343 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 MRPL10Q7Z7H8 261 aaKnown RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 NEK11Q8NG66 645 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 OR52K2Q8NGK3 314 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 LMBR1Q8WVP7 490 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ZKSCAN4Q969J2 545 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 RBM18Q96H35 190 aaKnown RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 CEP295NLQ96MC4 621 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 TUBA1CQ9BQE3 449 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 C8orf33Q9H7E9 229 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 SLC5A4Q9NY91 659 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ATXN10Q9UBB4 475 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 MTRF1LQ9UGC7 380 aaKnown RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 LAMP5Q9UJQ1 280 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ZNF112Q9UJU3 913 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 FBXO10Q9UK96 956 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 AGO2Q9UKV8 859 aaKnown RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ZMYND8Q9ULU4 1186 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-216ENST00000523088 DUSP12Q9UNI6 340 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ANGPTL3Q9Y5C1 460 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ATP6V1DQ9Y5K8 247 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 SNCAIPQ9Y6H5 919 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 AOX1Q06278 1338 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 ATRNL1Q5VV63 1379 aa8.17□□□□□ -1.1
HDAC3-216ENST00000523088 GPR75-ASB3A0A0A6YYF3 556 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 GOLGA6L7A0A1B0GV03 622 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 A6NCN8 305 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 CXCL11O14625 94 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 CETN3O15182 167 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 TSPAN6O43657 245 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 ACTN4O43707 911 aaKnown RBP8.16□□□□□ -1.1
HDAC3-216ENST00000523088 B4GALT4O60513 344 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 MAP3K6O95382 1288 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 PNMA6AP0CW24 399 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-216ENST00000523088 UBL4AP11441 157 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 ALAS1P13196 640 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 ADORA1P30542 326 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 BTDP43251 543 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 CACNB3P54284 484 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 ATP8B2P98198 1209 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 PLCB3Q01970 1234 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 CYP4A11Q02928 519 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 GRSF1Q12849 480 aaKnown RBP eCLIP8.16□□□□□ -1.1
HDAC3-216ENST00000523088 LRP8Q14114 963 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 KLHL40Q2TBA0 621 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 PABPC1LQ4VXU2 614 aaKnown RBP8.16□□□□□ -1.1
HDAC3-216ENST00000523088 PLEKHG4Q58EX7 1191 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 TTC39AQ5SRH9 613 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 CRTC1Q6UUV9 634 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 CEP68Q76N32 757 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 FASTKD5Q7L8L6 764 aaKnown RBP8.16□□□□□ -1.1
HDAC3-216ENST00000523088 GPIHBP1Q8IV16 184 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 ZSCAN29Q8IWY8 852 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-216ENST00000523088 SCYL3Q8IZE3 742 aa8.16□□□□□ -1.1
HDAC3-216ENST00000523088 OTUD7AQ8TE49 926 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-216ENST00000523088 ZNF653Q96CK0 615 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms