RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 SSRP1Q08945 709 aaKnown RBP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 NSUN2Q08J23 767 aaKnown RBP eCLIP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 C6orf118Q5T5N4 469 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 ZSCAN29Q8IWY8 852 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 CKAP2Q8WWK9 683 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 CRAMP1Q96RY5 1269 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 ZNF184Q99676 751 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 CELF4Q9BZC1 486 aaKnown RBP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 SLC7A5P2Q9GIP4 190 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 ZMYND12Q9H0C1 365 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 COPRSQ9NQ92 184 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 LRRC53A6NM62 1247 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 BTBD19C9JJ37 291 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 KLRC1P26715 233 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 GRIA2P42262 883 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 TXKP42681 527 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 RFX5P48382 616 aaPredicted RBP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 KCNMA1Q12791 1236 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 R3HDM1Q15032 1099 aaKnown RBP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 VSIG1Q86XK7 387 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 EPS8L3Q8TE67 593 aaKnown RBP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 USP33Q8TEY7 942 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 NMD3Q96D46 503 aaKnown RBP12.95□□□□□ -0.34
SPIDR-217ENST00000522117 ERP27Q96DN0 273 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 DYDC2Q96IM9 177 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 MYL10Q9BUA6 226 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 HEY1Q9Y5J3 304 aa12.95□□□□□ -0.34
SPIDR-217ENST00000522117 P4HA2O15460 535 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 TBX10O75333 385 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 HOXB7P09629 217 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 CDK4P11802 303 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 PORP16435 677 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-217ENST00000522117 PMS2P54278 862 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 GEMIN4P57678 1058 aaKnown RBP12.94□□□□□ -0.34
SPIDR-217ENST00000522117 DENND2CQ68D51 928 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 ZDHHC18Q9NUE0 388 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 AIPL1Q9NZN9 384 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 ITGB1BP2Q9UKP3 347 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 CHKBQ9Y259 395 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 SIK3Q9Y2K2 1263 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 ZNF711Q9Y462 761 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 IGSF1Q8N6C5 1336 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 GOLGA8AA7E2F4 631 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 EIF3FO00303 357 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-217ENST00000522117 WNT7AO00755 349 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 TRAFD1O14545 582 aaPredicted RBP12.94□□□□□ -0.34
SPIDR-217ENST00000522117 CAPN9O14815 690 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 ZBTB43O43298 467 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 GCP02774 474 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 TROVE2P10155 538 aaKnown RBP eCLIP12.94□□□□□ -0.34
SPIDR-217ENST00000522117 AUHQ13825 339 aaKnown RBP12.94□□□□□ -0.34
SPIDR-217ENST00000522117 PROSER3Q2NL68 480 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 SMUG1Q53HV7 270 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 CFAP157Q5JU67 520 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 HGSNATQ68CP4 663 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 INTS8Q75QN2 995 aaKnown RBP12.94□□□□□ -0.34
SPIDR-217ENST00000522117 DAAM2Q86T65 1068 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 TRIM50Q86XT4 487 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 RBM46Q8TBY0 533 aaKnown RBP12.94□□□□□ -0.34
SPIDR-217ENST00000522117 MORC4Q8TE76 937 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 EEF2KMTQ96G04 330 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 TMEM109Q9BVC6 243 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 CROTQ9UKG9 612 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 MYH6P13533 1939 aa12.94□□□□□ -0.34
SPIDR-217ENST00000522117 TRIM75PA6NK02 468 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 MAP3K7O43318 606 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 PTPN12Q05209 780 aaKnown RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 SLC29A2Q14542 456 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 MAP7D1Q3KQU3 841 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 FAAH2Q6GMR7 532 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 DSTYKQ6XUX3 929 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 CNOT6LQ96LI5 555 aaKnown RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 NAP1L3Q99457 506 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 CCDC113Q9H0I3 377 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 SLITRK6Q9H5Y7 841 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 PTTG2Q9NZH5 202 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 DBR1Q9UK59 544 aaKnown RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 ZNF148Q9UQR1 794 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 NOC2LQ9Y3T9 749 aaKnown RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 NFAT5O94916 1531 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 WDR46O15213 610 aaKnown RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 BIRC5O15392 142 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 OR6B1O95007 311 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 MARK3P27448 753 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 SLCO1A2P46721 670 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 POLGP54098 1239 aaPredicted RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 POU5F1Q01860 360 aaKnown RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 MTFR1Q15390 333 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 ZCWPW2Q504Y3 356 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 ACSBG2Q5FVE4 666 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 THOC7Q6I9Y2 204 aaKnown RBP12.93□□□□□ -0.34
SPIDR-217ENST00000522117 VSTM1Q6UX27 236 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 RRAGAQ7L523 313 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 HS2ST1Q7LGA3 356 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 GAB3Q8WWW8 586 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 BAP1Q92560 729 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 SNX27Q96L92 541 aa12.93□□□□□ -0.34
SPIDR-217ENST00000522117 TRIM51Q9BSJ1 452 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 230.2 ms