RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 IGLV3-22A0A075B6J6 115 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 IPO5O00410 1097 aaKnown RBP17.7■□□□□ 0.42
HDAC6-236ENST00000498808 KRT37O76014 449 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 CFHP08603 1231 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 CALM1P0DP23 149 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 CALM2P0DP24 149 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 CALM3P0DP25 149 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 ZNF76P36508 570 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 LIFRP42702 1097 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 CLK2P49760 499 aaKnown RBP17.7■□□□□ 0.42
HDAC6-236ENST00000498808 GPC3P51654 580 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 RSAD2Q8WXG1 361 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 MAP4K1Q92918 833 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 TMEM87BQ96K49 555 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 NRDE2Q9H7Z3 1164 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 DLL3Q9NYJ7 618 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 IGSF9Q9P2J2 1179 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 WNT16Q9UBV4 365 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 CEP131Q9UPN4 1083 aa17.7■□□□□ 0.42
HDAC6-236ENST00000498808 SGSM2O43147 1006 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 CSDE1O75534 798 aaKnown RBP17.69■□□□□ 0.42
HDAC6-236ENST00000498808 GALTP07902 379 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 CLCN4P51793 760 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 ADCY7P51828 1080 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 AP3B2Q13367 1082 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 LETM2Q2VYF4 491 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 TTC22Q5TAA0 569 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 PPP1R18Q6NYC8 613 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 PPFIBP1Q86W92 1011 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 TEX2Q8IWB9 1127 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 FANCBQ8NB91 859 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 LPPQ93052 612 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 KLHL5Q96PQ7 755 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 TBC1D13Q9NVG8 400 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 DACT1Q9NYF0 836 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 GABBR1Q9UBS5 961 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 RBM8AQ9Y5S9 174 aaKnown RBP17.69■□□□□ 0.42
HDAC6-236ENST00000498808 GPR179Q6PRD1 2367 aa17.69■□□□□ 0.42
HDAC6-236ENST00000498808 DOCK8Q8NF50 2099 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 SPDYE4A6NLX3 237 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 STK25O00506 426 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 B4GALT3O60512 393 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 TMOD1P28289 359 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 MCM5P33992 734 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 ZNF746Q6NUN9 644 aaPredicted RBP17.68■□□□□ 0.42
HDAC6-236ENST00000498808 C15orf39Q6ZRI6 1047 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 MICU3Q86XE3 530 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 DCLK2Q8N568 766 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 CRYGNQ8WXF5 182 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 CNTNAP3BQ96NU0 1288 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 CNTNAP3Q9BZ76 1288 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 TBC1D17Q9HA65 648 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 DNAJB4Q9UDY4 337 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 CA14Q9ULX7 337 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 SLC12A7Q9Y666 1083 aa17.68■□□□□ 0.42
HDAC6-236ENST00000498808 MEIS3P2A8K0S8 358 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 ZNF862O60290 1169 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 PSAPP07602 524 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 CNPP09543 421 aaKnown RBP17.67■□□□□ 0.42
HDAC6-236ENST00000498808 PHKA2P46019 1235 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 SLC11A1P49279 550 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 AAMPQ13685 434 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 LONRF3Q496Y0 759 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 SMAP1Q8IYB5 467 aaPredicted RBP17.67■□□□□ 0.42
HDAC6-236ENST00000498808 ZNF710Q8N1W2 664 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 SCLT1Q96NL6 688 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 HINFPQ9BQA5 517 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 ZNF577Q9BSK1 485 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 LRRC2Q9BYS8 371 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 DLGAP2Q9P1A6 1054 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 PCDHA10Q9Y5I2 948 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 CACNA1IQ9P0X4 2223 aa17.67■□□□□ 0.42
HDAC6-236ENST00000498808 KMT2BQ9UMN6 2715 aaPredicted RBP17.66■□□□□ 0.42
HDAC6-236ENST00000498808 SPTBN2O15020 2390 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 FRYLO94915 3013 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 SMCO2A6NFE2 343 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 LILRB3O75022 631 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 DCNP07585 359 aaKnown RBP17.66■□□□□ 0.42
HDAC6-236ENST00000498808 SP9P0CG40 484 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 KLRC2P26717 231 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 TBC1D8BQ0IIM8 1120 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 FUT2Q10981 343 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 NOMO2Q5JPE7 1267 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 RSPH1Q8WYR4 309 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 RUBCNQ92622 972 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 FAM167AQ96KS9 214 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 TRAIPQ9BWF2 469 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 TBC1D22BQ9NU19 505 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 INPP5FQ9Y2H2 1132 aa17.66■□□□□ 0.42
HDAC6-236ENST00000498808 CARNS1A5YM72 827 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 SSBP05455 408 aaKnown RBP eCLIP17.65■□□□□ 0.42
HDAC6-236ENST00000498808 CYP3A4P08684 503 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 RFX1P22670 979 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 GBP2P32456 591 aaPredicted RBP17.65■□□□□ 0.42
HDAC6-236ENST00000498808 DRP2Q13474 957 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 SPECC1Q5M775 1068 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 JAKMIP3Q5VZ66 844 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 ZC3H14Q6PJT7 736 aaKnown RBP17.65■□□□□ 0.42
HDAC6-236ENST00000498808 GLB1LQ6UWU2 654 aa17.65■□□□□ 0.42
HDAC6-236ENST00000498808 SGMS1Q86VZ5 419 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms