RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 TIGD1Q96MW7 591 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 TRIM9Q9C026 710 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 WNT8AQ9H1J5 351 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 BLZF1Q9H2G9 400 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 C17orf75Q9HAS0 396 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 PARVGQ9HBI0 331 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 LARSQ9P2J5 1176 aaKnown RBP16.11■□□□□ 0.17
BRCA1-223ENST00000494123 A0A087WZ62 844 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 GPR32O75388 356 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 PARNO95453 639 aaKnown RBP16.1■□□□□ 0.17
BRCA1-223ENST00000494123 MYL1P05976 194 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 IQCF3P0C7M6 154 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 NAMPTP43490 491 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 PHKA2P46019 1235 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 PEX3P56589 373 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 MGAT3Q09327 533 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 MAPK7Q13164 816 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 CAPSQ13938 189 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 DAW1Q8N136 415 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 TMEM199Q8N511 208 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 MYCT1Q8N699 235 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 DEPTORQ8TB45 409 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 OSMRQ99650 979 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 C7orf25Q9BPX7 421 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 FDXACB1Q9BRP7 624 aaPredicted RBP16.1■□□□□ 0.17
BRCA1-223ENST00000494123 GCOM2Q9BZD3 368 aaPredicted RBP16.1■□□□□ 0.17
BRCA1-223ENST00000494123 ADAMTS10Q9H324 1103 aa16.1■□□□□ 0.17
BRCA1-223ENST00000494123 SIP14410 1827 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 CCDC169A6NNP5 214 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 GTPBP6O43824 516 aaPredicted RBP16.09■□□□□ 0.17
BRCA1-223ENST00000494123 PLS3P13797 630 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 SMTNP53814 917 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 CUL4BQ13620 913 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 ODR4Q5SWX8 454 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 MFSD5Q6N075 450 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 CCDC65Q8IXS2 484 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 BSNDQ8WZ55 320 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 DNAJC19Q96DA6 116 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 INO80BQ9C086 356 aaPredicted RBP16.09■□□□□ 0.17
BRCA1-223ENST00000494123 CDHR5Q9HBB8 845 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 PANK4Q9NVE7 773 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 KCNG1Q9UIX4 513 aa16.09■□□□□ 0.17
BRCA1-223ENST00000494123 GAP43P17677 238 aa16.08■□□□□ 0.17
BRCA1-223ENST00000494123 ITGB8P26012 769 aa16.08■□□□□ 0.17
BRCA1-223ENST00000494123 CASP1P29466 404 aa16.08■□□□□ 0.17
BRCA1-223ENST00000494123 RFC2P35250 354 aa16.08■□□□□ 0.17
BRCA1-223ENST00000494123 MLLT1Q03111 559 aaPredicted RBP16.08■□□□□ 0.17
BRCA1-223ENST00000494123 POSTNQ15063 836 aa16.08■□□□□ 0.17
BRCA1-223ENST00000494123 TRAF7Q6Q0C0 670 aa16.08■□□□□ 0.17
BRCA1-223ENST00000494123 ZBTB8OSQ8IWT0 167 aa16.08■□□□□ 0.17
BRCA1-223ENST00000494123 LBHD1Q9BQE6 289 aaPredicted RBP16.08■□□□□ 0.17
BRCA1-223ENST00000494123 KMT5AQ9NQR1 393 aa16.08■□□□□ 0.17
BRCA1-223ENST00000494123 LTBP2Q14767 1821 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 MBD3O95983 291 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 GHRP10912 638 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 DARSP14868 501 aaKnown RBP16.08■□□□□ 0.16
BRCA1-223ENST00000494123 PTMSP20962 102 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 EIF4BP23588 611 aaKnown RBP16.08■□□□□ 0.16
BRCA1-223ENST00000494123 NPTX2P47972 431 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 ZNF131P52739 623 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 HERC4Q5GLZ8 1057 aaPredicted RBP16.08■□□□□ 0.16
BRCA1-223ENST00000494123 FBXO47Q5MNV8 452 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 CNNM4Q6P4Q7 775 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 USP38Q8NB14 1042 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 BADQ92934 168 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 CCDC47Q96A33 483 aaKnown RBP16.08■□□□□ 0.16
BRCA1-223ENST00000494123 C2orf40Q9H1Z8 148 aa16.08■□□□□ 0.16
BRCA1-223ENST00000494123 SCN5AQ14524 2016 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 TRAK2O60296 914 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 RPS6KA5O75582 802 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 PRR29P0C7W0 189 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 CSF2RAP15509 400 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 SFPQP23246 707 aaKnown RBP eCLIP16.07■□□□□ 0.16
BRCA1-223ENST00000494123 PTENP60484 403 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 FPGSQ05932 587 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 POU5F1BQ06416 359 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 LPIN1Q14693 890 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 MBTPS1Q14703 1052 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 TSHZ1Q6ZSZ6 1077 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 UNC13DQ70J99 1090 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 SRGAP1Q7Z6B7 1085 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 DEFB128Q7Z7B8 93 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 SFR1Q86XK3 245 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 FAM178BQ8IXR5 827 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 TMEM40Q8WWA1 233 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 KIFC3Q9BVG8 833 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 IFT122Q9HBG6 1241 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 PCDH10Q9P2E7 1040 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 SQORQ9Y6N5 450 aa16.07■□□□□ 0.16
BRCA1-223ENST00000494123 PVALEFA0A1B0GWK0 134 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 H0YCG3 227 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 INO80B-WBP1J3KQ70 363 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 K7ENM7 598 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 SLC16A4O15374 487 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 NBNO60934 754 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 COASYQ13057 564 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 PAK2Q13177 524 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 PPIGQ13427 754 aaKnown RBP eCLIP16.06■□□□□ 0.162e-6■■■■□ 20.9
BRCA1-223ENST00000494123 PNOCQ13519 176 aa16.06■□□□□ 0.16
BRCA1-223ENST00000494123 RPUSD2Q8IZ73 545 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms