RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ZNF277Q9NRM2 450 aaPredicted RBP5.73□□□□□ -1.49
VPS13A-211ENST00000484581 SAP30BPQ9UHR5 308 aaKnown RBP5.73□□□□□ -1.49
VPS13A-211ENST00000484581 TAGLN3Q9UI15 199 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 DSEQ9UL01 958 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 PTPN22Q9Y2R2 807 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 NUB1Q9Y5A7 615 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 ATP23Q9Y6H3 246 aa5.73□□□□□ -1.49
VPS13A-211ENST00000484581 APAF1O14727 1248 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 PPP1R11O60927 126 aaPredicted RBP5.72□□□□□ -1.49
VPS13A-211ENST00000484581 FUCA1P04066 466 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 ENPP1P22413 925 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 PTX3P26022 381 aaPredicted RBP5.72□□□□□ -1.49
VPS13A-211ENST00000484581 SDHAP31040 664 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 GJA4P35212 333 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 MTNR1BP49286 362 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 ADCY1Q08828 1119 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 ZRSR2Q15696 482 aaKnown RBP5.72□□□□□ -1.49
VPS13A-211ENST00000484581 FSCN1Q16658 493 aaKnown RBP5.72□□□□□ -1.49
VPS13A-211ENST00000484581 EMC4Q5J8M3 183 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 C10orf62Q5T681 223 aaPredicted RBP5.72□□□□□ -1.49
VPS13A-211ENST00000484581 CPZQ66K79 652 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 CHST15Q7LFX5 561 aaPredicted RBP5.72□□□□□ -1.49
VPS13A-211ENST00000484581 FAM43AQ8N2R8 423 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS13A-211ENST00000484581 TGFBRAP1Q8WUH2 860 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 E2F7Q96AV8 911 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 C16orf92Q96LL3 132 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 NOX5Q96PH1 765 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 MTA3Q9BTC8 594 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 PCDH18Q9HCL0 1135 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 DNAJC28Q9NX36 388 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 MSRAQ9UJ68 235 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 GPR45Q9Y5Y3 372 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 DUSP10Q9Y6W6 482 aa5.72□□□□□ -1.49
VPS13A-211ENST00000484581 LCHNA4D1U4 455 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 MAFKO60675 156 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 FOSP01100 380 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-211ENST00000484581 MAGEA10P43363 369 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-211ENST00000484581 ZNF280AP59817 542 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-211ENST00000484581 SRSF2Q01130 221 aaKnown RBP5.71□□□□□ -1.5
VPS13A-211ENST00000484581 MOGSQ13724 837 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 KCTD1Q719H9 257 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 SRGAP1Q7Z6B7 1085 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 CXorf67Q86X51 503 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-211ENST00000484581 NME9Q86XW9 330 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 MIER2Q8N344 545 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 DDX11Q96FC9 970 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 FAM193BQ96PV7 902 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-211ENST00000484581 ELAC2Q9BQ52 826 aaKnown RBP5.71□□□□□ -1.5
VPS13A-211ENST00000484581 CD244Q9BZW8 370 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 SPATA6Q9NWH7 488 aaPredicted RBP5.71□□□□□ -1.5
VPS13A-211ENST00000484581 FBLN5Q9UBX5 448 aa5.71□□□□□ -1.5
VPS13A-211ENST00000484581 PMM2O15305 246 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 AP1G1O43747 822 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 CTNND1O60716 968 aaKnown RBP5.7□□□□□ -1.5
VPS13A-211ENST00000484581 NTRK1P04629 796 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 ITGB3P05106 788 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 CYP2C8P10632 490 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 RHCEP18577 417 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 C5AR1P21730 350 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 EPHA5P54756 1037 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 MANFP55145 182 aaKnown RBP5.7□□□□□ -1.5
VPS13A-211ENST00000484581 RHDQ02161 417 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 KIAA2012Q0VF49 1180 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 SMAD4Q13485 552 aaKnown RBP5.7□□□□□ -1.5
VPS13A-211ENST00000484581 TMEM132BQ14DG7 1078 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 SEC23AQ15436 765 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 CHRNA2Q15822 529 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 GRAMD1BQ3KR37 738 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 ATAT1Q5SQI0 421 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 APBB1IPQ7Z5R6 666 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-211ENST00000484581 CATIPQ7Z7H3 387 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 MORC1Q86VD1 984 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 ZNF761Q86XN6 746 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-211ENST00000484581 FAM9AQ8IZU1 332 aaPredicted RBP5.7□□□□□ -1.5
VPS13A-211ENST00000484581 RTF1Q92541 710 aaKnown RBP5.7□□□□□ -1.5
VPS13A-211ENST00000484581 HPS3Q969F9 1004 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 GJA10Q969M2 543 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 UBA5Q9GZZ9 404 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 WNT8AQ9H1J5 351 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 SMPD4Q9NXE4 827 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 KCNG1Q9UIX4 513 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 INTUQ9ULD6 942 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 DNM3Q9UQ16 869 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 FAM50BQ9Y247 325 aa5.7□□□□□ -1.5
VPS13A-211ENST00000484581 ZBED1O96006 694 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 MTHFD2P13995 350 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 SLC6A11P48066 632 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 USP14P54578 494 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 MRPS9P82933 396 aaKnown RBP5.69□□□□□ -1.5
VPS13A-211ENST00000484581 ZNF267Q14586 743 aaPredicted RBP5.69□□□□□ -1.5
VPS13A-211ENST00000484581 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS13A-211ENST00000484581 HSP90AB4PQ58FF6 505 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 TOR2AQ5JU69 321 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 CATSPEREQ5SY80 951 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 TOGARAM2Q6ZUX3 1019 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 ESPNLQ6ZVH7 1005 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 KCNK18Q7Z418 384 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 FAM124AQ86V42 546 aa5.69□□□□□ -1.5
VPS13A-211ENST00000484581 DCP2Q8IU60 420 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms