RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 LRRC55Q6ZSA7 311 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 RBM23Q86U06 439 aaKnown RBP10.57□□□□□ -0.72
NUP50-215ENST00000484186 ZNF598Q86UK7 904 aaKnown RBP10.57□□□□□ -0.72
NUP50-215ENST00000484186 RHPN2Q8IUC4 686 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 C4orf19Q8IY42 314 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 EXOC8Q8IYI6 725 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 SLFN12Q8IYM2 578 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 ABI1Q8IZP0 508 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 RNF169Q8NCN4 708 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 GTF3C6Q969F1 213 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 CEP170P1Q96L14 293 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 FDXACB1Q9BRP7 624 aaPredicted RBP10.57□□□□□ -0.72
NUP50-215ENST00000484186 LRFN3Q9BTN0 628 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 TLE6Q9H808 572 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 TLR9Q9NR96 1032 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 PUF60Q9UHX1 559 aaKnown RBP10.57□□□□□ -0.72
NUP50-215ENST00000484186 CD207Q9UJ71 328 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 LZTS1Q9Y250 596 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 PPME1Q9Y570 386 aa10.57□□□□□ -0.72
NUP50-215ENST00000484186 ATG2AQ2TAZ0 1938 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 KIAA1671Q9BY89 1806 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 FAM205CA6NFA0 338 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 C19orf67A6NJJ6 358 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 FSCN2O14926 492 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 EYA4O95677 639 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 ALADP13716 330 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 SFPQP23246 707 aaKnown RBP eCLIP10.56□□□□□ -0.72
NUP50-215ENST00000484186 ERVFC1P60507 584 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 ZP2Q05996 745 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 SMAD4Q13485 552 aaKnown RBP10.56□□□□□ -0.72
NUP50-215ENST00000484186 TMEM31Q5JXX7 168 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 CLLU1OSQ5K130 101 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 NCAPH2Q6IBW4 605 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 KCNT2Q6UVM3 1135 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 OTUD6AQ7L8S5 288 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 KSR1Q8IVT5 923 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 ADHFE1Q8IWW8 467 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 LRRC43Q8N309 656 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 ZNF579Q8NAF0 562 aaKnown RBP10.56□□□□□ -0.72
NUP50-215ENST00000484186 NSUN7Q8NE18 718 aaKnown RBP10.56□□□□□ -0.72
NUP50-215ENST00000484186 SLC7A3Q8WY07 619 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 MRPS27Q92552 414 aaKnown RBP10.56□□□□□ -0.72
NUP50-215ENST00000484186 TNFRSF25Q93038 417 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 DYDC2Q96IM9 177 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 MSLNLQ96KJ4 702 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 ZNF558Q96NG5 402 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 TRAIPQ9BWF2 469 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 DHX33Q9H6R0 707 aaKnown RBP10.56□□□□□ -0.72
NUP50-215ENST00000484186 RGL1Q9NZL6 768 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 CLEC1BQ9P126 229 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 WRAP73Q9P2S5 460 aaPredicted RBP10.56□□□□□ -0.72
NUP50-215ENST00000484186 RAPGEFL1Q9UHV5 662 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 PCDHGC5Q9Y5F6 944 aa10.56□□□□□ -0.72
NUP50-215ENST00000484186 FSD2A1L4K1 749 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 BTBD18B2RXH4 712 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 PER2O15055 1255 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 SLITRK3O94933 977 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 SEC24BO95487 1268 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 SKIP12755 728 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 ATF7P17544 494 aaPredicted RBP10.55□□□□□ -0.72
NUP50-215ENST00000484186 YWHABP31946 246 aaKnown RBP10.55□□□□□ -0.72
NUP50-215ENST00000484186 PPM1AP35813 382 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 RFC5P40937 340 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 PHKA2P46019 1235 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 POLGP54098 1239 aaPredicted RBP10.55□□□□□ -0.72
NUP50-215ENST00000484186 KRT17Q04695 432 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 SPIRE1Q08AE8 756 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 COASYQ13057 564 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 CTTNQ14247 550 aaKnown RBP10.55□□□□□ -0.72
NUP50-215ENST00000484186 TWF2Q6IBS0 349 aaKnown RBP10.55□□□□□ -0.72
NUP50-215ENST00000484186 CATSPER4Q7RTX7 472 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 HELQQ8TDG4 1101 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 PRPF31Q8WWY3 499 aaKnown RBP10.55□□□□□ -0.72
NUP50-215ENST00000484186 NLRP4Q96MN2 994 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 CDCA3Q99618 268 aaPredicted RBP10.55□□□□□ -0.72
NUP50-215ENST00000484186 LXNQ9BS40 222 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 ZSWIM4Q9H7M6 989 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 IFT122Q9HBG6 1241 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 NGRNQ9NPE2 291 aaKnown RBP10.55□□□□□ -0.72
NUP50-215ENST00000484186 C11orf16Q9NQ32 467 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 SPG21Q9NZD8 308 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 PCDHA12Q9UN75 941 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 COL4A3BPQ9Y5P4 624 aa10.55□□□□□ -0.72
NUP50-215ENST00000484186 ZBTB39O15060 712 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 ASAP2O43150 1006 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 GAS2O43903 313 aaKnown RBP10.54□□□□□ -0.72
NUP50-215ENST00000484186 JAK2O60674 1132 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 ZNF623O75123 536 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 GLP2RO95838 553 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 SRGAP2CP0DJJ0 459 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 PBX3P40426 434 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 TRIM29Q14134 588 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 DUSP6Q16828 381 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 XKR9Q5GH70 373 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 SRGAP1Q7Z6B7 1085 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 TPH2Q8IWU9 490 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 DIS3L2Q8IYB7 885 aaKnown RBP10.54□□□□□ -0.72
NUP50-215ENST00000484186 SMRP1Q8NCR6 262 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 TCP11Q8WWU5 503 aa10.54□□□□□ -0.72
NUP50-215ENST00000484186 PSPC1Q8WXF1 523 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms