RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 BCAR1P56945 870 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 AKAP17AQ02040 695 aaKnown RBP13.53□□□□□ -0.24
GCA-208ENST00000479199 TARBP2Q15633 366 aaKnown RBP13.53□□□□□ -0.24
GCA-208ENST00000479199 NTRK3Q16288 839 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 LONRF3Q496Y0 759 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 MTERF2Q49AM1 385 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 LRCH2Q5VUJ6 765 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 BLOC1S2Q6QNY1 142 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 MRPL43Q8N983 215 aaKnown RBP13.53□□□□□ -0.24
GCA-208ENST00000479199 KREMEN2Q8NCW0 462 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 BICD2Q8TD16 824 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 AUTS2Q8WXX7 1259 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 LPPQ93052 612 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 RIT2Q99578 217 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 SH2D3AQ9BRG2 576 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 TEKT3Q9BXF9 490 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 RNF26Q9BY78 433 aaPredicted RBP13.53□□□□□ -0.24
GCA-208ENST00000479199 MRPL9Q9BYD2 267 aaKnown RBP13.53□□□□□ -0.24
GCA-208ENST00000479199 NCOA5Q9HCD5 579 aaKnown RBP13.53□□□□□ -0.24
GCA-208ENST00000479199 NRBP2Q9NSY0 501 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 SNX14Q9Y5W7 946 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 FAM186AA6NE01 2351 aa13.53□□□□□ -0.24
GCA-208ENST00000479199 ZFHX2Q9C0A1 2572 aaPredicted RBP13.53□□□□□ -0.24
GCA-208ENST00000479199 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.52□□□□□ -0.25
GCA-208ENST00000479199 ZC3H11AO75152 810 aaKnown RBP eCLIP13.52□□□□□ -0.25
GCA-208ENST00000479199 TDP2O95551 362 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 BRD1O95696 1058 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 AVPR2P30518 371 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 SFNP31947 248 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 TPRNQ4KMQ1 711 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 RARS2Q5T160 578 aaKnown RBP13.52□□□□□ -0.25
GCA-208ENST00000479199 CES5AQ6NT32 575 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 KANK3Q6NY19 840 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 ZNF710Q8N1W2 664 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 C12orf76Q8N812 135 aaPredicted RBP13.52□□□□□ -0.25
GCA-208ENST00000479199 FEZF2Q8TBJ5 459 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 BCL7CQ8WUZ0 217 aaPredicted RBP13.52□□□□□ -0.25
GCA-208ENST00000479199 KCNB2Q92953 911 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 TMEM169Q96HH4 297 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 ZBP1Q9H171 429 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 ADAM7Q9H2U9 754 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 DACT1Q9NYF0 836 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 NR2E1Q9Y466 385 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 MTCL1Q9Y4B5 1905 aaKnown RBP13.52□□□□□ -0.25
GCA-208ENST00000479199 CFAP54Q96N23 3096 aa13.52□□□□□ -0.25
GCA-208ENST00000479199 RIF1Q5UIP0 2472 aaKnown RBP13.51□□□□□ -0.25
GCA-208ENST00000479199 PTPRZ1P23471 2315 aaPredicted RBP13.51□□□□□ -0.25
GCA-208ENST00000479199 A0A087WZ62 844 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 MEIS3P2A8K0S8 358 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 GFRA3O60609 400 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 PSMD10O75832 226 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 STBD1O95210 358 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 EOMESO95936 686 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 ASGR2P07307 311 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 EPCAMP16422 314 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 RPS6KB1P23443 525 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 HSPA4P34932 840 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 PHKA2P46019 1235 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
GCA-208ENST00000479199 MTMR3Q13615 1198 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 MIER3Q7Z3K6 550 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 VPS52Q8N1B4 723 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 RIPOR3Q96MK2 946 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 NECTIN4Q96NY8 510 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 CEP89Q96ST8 783 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 FDXACB1Q9BRP7 624 aaPredicted RBP13.51□□□□□ -0.25
GCA-208ENST00000479199 GCOM2Q9BZD3 368 aaPredicted RBP13.51□□□□□ -0.25
GCA-208ENST00000479199 SORCS3Q9UPU3 1222 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
GCA-208ENST00000479199 INPP5FQ9Y2H2 1132 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 SPTBN4Q9H254 2564 aa13.51□□□□□ -0.25
GCA-208ENST00000479199 B4GALT3O60512 393 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 CXCL14O95715 111 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 IFNAR1P17181 557 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 SFPQP23246 707 aaKnown RBP eCLIP13.5□□□□□ -0.25
GCA-208ENST00000479199 ALDH7A1P49419 539 aaKnown RBP13.5□□□□□ -0.25
GCA-208ENST00000479199 USP11P51784 963 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 NLRP5P59047 1200 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 ITIH3Q06033 890 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 PLA2G4FQ68DD2 849 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 TWF2Q6IBS0 349 aaKnown RBP13.5□□□□□ -0.25
GCA-208ENST00000479199 KIAA1841Q6NSI8 718 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 CENPQQ7L2Z9 268 aaPredicted RBP13.5□□□□□ -0.25
GCA-208ENST00000479199 TDRD5Q8NAT2 981 aaKnown RBP13.5□□□□□ -0.25
GCA-208ENST00000479199 TBCKQ8TEA7 893 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 ATOH1Q92858 354 aaPredicted RBP13.5□□□□□ -0.25
GCA-208ENST00000479199 VN1R3Q9BXE9 311 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 NIFKQ9BYG3 293 aaKnown RBP13.5□□□□□ -0.25
GCA-208ENST00000479199 AGXT2Q9BYV1 514 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 TBC1D13Q9NVG8 400 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 DOCK6Q96HP0 2047 aa13.5□□□□□ -0.25
GCA-208ENST00000479199 IGKV6-21A0A0C4DH24 114 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 H0Y858 1186 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 ST18O60284 1047 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 CTSAP10619 480 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 MTHFRP42898 656 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 Q4G0T1 1027 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 XKR3Q5GH77 459 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 B3GNT9Q6UX72 402 aa13.49□□□□□ -0.25
GCA-208ENST00000479199 RHPN2Q8IUC4 686 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms