RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 COL4A4P53420 1690 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-221ENST00000477561 H3BNC9 293 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 LYPLA2O95372 231 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 DDIT3P35638 169 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 TRAPPC10P48553 1259 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 FAM189BP81408 668 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 CDC42EP1Q00587 391 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 TFF2Q03403 129 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 LAMTOR4Q0VGL1 99 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 PTGDRQ13258 359 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 ORC2Q13416 577 aaPredicted RBP9.22□□□□□ -0.93
HDAC6-221ENST00000477561 LONRF3Q496Y0 759 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 SPOUT1Q5T280 376 aaKnown RBP9.22□□□□□ -0.93
HDAC6-221ENST00000477561 LARP1BQ659C4 914 aaKnown RBP9.22□□□□□ -0.93
HDAC6-221ENST00000477561 POTEGQ6S5H5 508 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 CATSPER4Q7RTX7 472 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 ZNF410Q86VK4 478 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 CMTR2Q8IYT2 770 aaKnown RBP9.22□□□□□ -0.93
HDAC6-221ENST00000477561 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 RNF149Q8NC42 400 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 NEK9Q8TD19 979 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 PSPC1Q8WXF1 523 aaKnown RBP9.22□□□□□ -0.93
HDAC6-221ENST00000477561 MTRQ99707 1265 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 MINDY3Q9H8M7 445 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 IFT122Q9HBG6 1241 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 ALG13Q9NP73 1137 aaKnown RBP9.22□□□□□ -0.93
HDAC6-221ENST00000477561 XPNPEP1Q9NQW7 623 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 ANKEF1Q9NU02 776 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 TMEM161AQ9NX61 479 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 THEGQ9P2T0 379 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 PIN4Q9Y237 131 aaKnown RBP9.22□□□□□ -0.93
HDAC6-221ENST00000477561 TTC3P53804 2025 aa9.22□□□□□ -0.93
HDAC6-221ENST00000477561 XIRP2A4UGR9 3374 aa9.21□□□□□ -0.93
HDAC6-221ENST00000477561 COL4A6Q14031 1691 aa9.21□□□□□ -0.93
HDAC6-221ENST00000477561 PP2D1A8MPX8 630 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 GRM6O15303 877 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 USO1O60763 962 aaKnown RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 SFPQP23246 707 aaKnown RBP eCLIP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 CCT6AP40227 531 aaKnown RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 RARRES1P49788 294 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 IL17AQ16552 155 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 ECM1Q16610 540 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 TWF2Q6IBS0 349 aaKnown RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 FERMT3Q86UX7 667 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 ECHDC2Q86YB7 292 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 EXOC8Q8IYI6 725 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 ERMNQ8TAM6 284 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 TCP11Q8WWU5 503 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 CLP1Q92989 425 aaKnown RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 LPPQ93052 612 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 MRPL38Q96DV4 380 aaKnown RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 POLR3CQ9BUI4 534 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 COL25A1Q9BXS0 654 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 INO80BQ9C086 356 aaPredicted RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 POLD4Q9HCU8 107 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 TUFT1Q9NNX1 390 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 GPRC5CQ9NQ84 441 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 RNF19AQ9NV58 838 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 TYW1Q9NV66 732 aaKnown RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 LMCD1Q9NZU5 365 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 LRWD1Q9UFC0 647 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 PPME1Q9Y570 386 aa9.21□□□□□ -0.94
HDAC6-221ENST00000477561 PRRC2BQ5JSZ5 2229 aaKnown RBP9.21□□□□□ -0.94
HDAC6-221ENST00000477561 VCANP13611 3396 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 A0A0U1RQF3 1178 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 C5orf67F2Z3F1 127 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 ASAP2O43150 1006 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 DGAT1O75907 488 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 RB1P06400 928 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 XRCC6P12956 609 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC6-221ENST00000477561 PDCP20941 246 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 RPA1P27694 616 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 CDC25AP30304 524 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 ARL2P36404 184 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.94
HDAC6-221ENST00000477561 PTPROQ16827 1216 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 SRGAP1Q7Z6B7 1085 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 KLHL23Q8NBE8 558 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 HELQQ8TDG4 1101 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 ASAP3Q8TDY4 903 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 CASD1Q96PB1 797 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 ASB2Q96Q27 587 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 NACC1Q96RE7 527 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 C11orf84Q9BUA3 381 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-221ENST00000477561 POLR3FQ9H1D9 316 aaPredicted RBP9.2□□□□□ -0.94
HDAC6-221ENST00000477561 ELAC1Q9H777 363 aaKnown RBP9.2□□□□□ -0.94
HDAC6-221ENST00000477561 CHST12Q9NRB3 414 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 DACT1Q9NYF0 836 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 PLAGL2Q9UPG8 496 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 RWDD3Q9Y3V2 267 aa9.2□□□□□ -0.94
HDAC6-221ENST00000477561 VPS37CA5D8V6 355 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 ARHGEF35A5YM69 484 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 MEIS3P2A8K0S8 358 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 INO80B-WBP1J3KQ70 363 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 GAS2O43903 313 aaKnown RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 ITGB1P05556 798 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 ATF7P17544 494 aaPredicted RBP9.19□□□□□ -0.94
HDAC6-221ENST00000477561 GLRA2P23416 452 aa9.19□□□□□ -0.94
HDAC6-221ENST00000477561 DNAJB1P25685 340 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms