RNA–Protein interactions for RNA: ENST00000477052.1

VARS2-208, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 552 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-208ENST00000477052 NLRP4Q96MN2 994 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 MBOAT7Q96N66 472 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 ZNF558Q96NG5 402 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 POP1Q99575 1024 aaKnown RBP13.11□□□□□ -0.31
VARS2-208ENST00000477052 NIFKQ9BYG3 293 aaKnown RBP13.11□□□□□ -0.31
VARS2-208ENST00000477052 SLKQ9H2G2 1235 aaPredicted RBP13.11□□□□□ -0.31
VARS2-208ENST00000477052 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
VARS2-208ENST00000477052 TPCN1Q9ULQ1 816 aa13.11□□□□□ -0.31
VARS2-208ENST00000477052 MUC6Q6W4X9 2439 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 A0A0U1RQF3 1178 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 ZBTB39O15060 712 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 FOSBP53539 338 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 HERC4Q5GLZ8 1057 aaPredicted RBP13.1□□□□□ -0.31
VARS2-208ENST00000477052 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 TMC7Q7Z402 723 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 TMEM173Q86WV6 379 aaPredicted RBP13.1□□□□□ -0.31
VARS2-208ENST00000477052 NECAB1Q8N987 351 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 PHF20Q9BVI0 1012 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 GCOM2Q9BZD3 368 aaPredicted RBP13.1□□□□□ -0.31
VARS2-208ENST00000477052 TM6SF1Q9BZW5 370 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
VARS2-208ENST00000477052 SPG21Q9NZD8 308 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 VAV3Q9UKW4 847 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 PIN4Q9Y237 131 aaKnown RBP13.1□□□□□ -0.31
VARS2-208ENST00000477052 INPP5FQ9Y2H2 1132 aa13.1□□□□□ -0.31
VARS2-208ENST00000477052 IGKV6-21A0A0C4DH24 114 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 CCDC194A0A1B0GVG4 234 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 LOC730098B7Z3J9 87 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 CCNT1O60563 726 aaKnown RBP13.09□□□□□ -0.31
VARS2-208ENST00000477052 CTDNEP1O95476 244 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 WEE2P0C1S8 567 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
VARS2-208ENST00000477052 BCAR1P56945 870 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 PLCB3Q01970 1234 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 TWF2Q6IBS0 349 aaKnown RBP13.09□□□□□ -0.31
VARS2-208ENST00000477052 SYCE2Q6PIF2 218 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
VARS2-208ENST00000477052 PIK3AP1Q6ZUJ8 805 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 KRT25Q7Z3Z0 450 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 POTEDQ86YR6 584 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 SLC39A11Q8N1S5 342 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 RDM1Q8NG50 284 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 BCL7CQ8WUZ0 217 aaPredicted RBP13.09□□□□□ -0.31
VARS2-208ENST00000477052 TMEM143Q96AN5 459 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 C22orf23Q9BZE7 217 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 GBP3Q9H0R5 595 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 S1PR5Q9H228 398 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 RGL1Q9NZL6 768 aa13.09□□□□□ -0.31
VARS2-208ENST00000477052 PUF60Q9UHX1 559 aaKnown RBP13.09□□□□□ -0.31
VARS2-208ENST00000477052 TECTAO75443 2155 aa13.08□□□□□ -0.31
VARS2-208ENST00000477052 HOXA2O43364 376 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 B4GALT3O60512 393 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 ZC3H11AO75152 810 aaKnown RBP eCLIP13.08□□□□□ -0.32
VARS2-208ENST00000477052 MAFO75444 373 aaPredicted RBP13.08□□□□□ -0.32
VARS2-208ENST00000477052 LARGE1O95461 756 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 SRGAP2CP0DJJ0 459 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 PHKA2P46019 1235 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 DNM2P50570 870 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 AFF1P51825 1210 aaKnown RBP13.08□□□□□ -0.32
VARS2-208ENST00000477052 PSMC5P62195 406 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 KRT17Q04695 432 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 NR5A1Q13285 461 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 KCNC3Q14003 757 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 NCAPH2Q6IBW4 605 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 ANKRD54Q6NXT1 300 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 CATSPER4Q7RTX7 472 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 ALYREFQ86V81 257 aaKnown RBP13.08□□□□□ -0.32
VARS2-208ENST00000477052 C12orf76Q8N812 135 aaPredicted RBP13.08□□□□□ -0.32
VARS2-208ENST00000477052 SUSD6Q92537 303 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 EDAQ92838 391 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 HAS1Q92839 578 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 FBXL18Q96ME1 805 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 PHF7Q9BWX1 381 aaPredicted RBP13.08□□□□□ -0.32
VARS2-208ENST00000477052 MINDY3Q9H8M7 445 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 KCNMB3Q9NPA1 279 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 CYP26B1Q9NR63 512 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 LZTS1Q9Y250 596 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 WDFY4Q6ZS81 3184 aa13.08□□□□□ -0.32
VARS2-208ENST00000477052 A0A087WWV3 80 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 C2orf71A6NGG8 1288 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 PFKFB2O60825 505 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 CLASP2O75122 1294 aaKnown RBP13.07□□□□□ -0.32
VARS2-208ENST00000477052 CXCL14O95715 111 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 EOMESO95936 686 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 QARSP47897 775 aaKnown RBP13.07□□□□□ -0.32
VARS2-208ENST00000477052 AK2P54819 239 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 CYP4A11Q02928 519 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 PPP2R5CQ13362 524 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 CTTNQ14247 550 aaKnown RBP13.07□□□□□ -0.32
VARS2-208ENST00000477052 CBX2Q14781 532 aaPredicted RBP13.07□□□□□ -0.32
VARS2-208ENST00000477052 ERICH6BQ5W0A0 696 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 GALNT17Q6IS24 598 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 MOXD1Q6UVY6 613 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 NEK8Q86SG6 692 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 PRPF31Q8WWY3 499 aaKnown RBP13.07□□□□□ -0.32
VARS2-208ENST00000477052 DYDC2Q96IM9 177 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 CEP170P1Q96L14 293 aa13.07□□□□□ -0.32
VARS2-208ENST00000477052 CDCA3Q99618 268 aaPredicted RBP13.07□□□□□ -0.32
VARS2-208ENST00000477052 IFT122Q9HBG6 1241 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms